Protein–RNA interactions for Protein: Q8R4U6

Top1mt, DNA topoisomerase I, mitochondrial, mousemouse

Predictions only

Length 593 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Top1mtQ8R4U6 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Mir6990-201ENSMUST00000183724 91 ntBASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Gm37411-201ENSMUST00000194180 2282 ntBASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Ctnnd2-203ENSMUST00000226119 4111 ntAPPRIS ALT2 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Myrf-201ENSMUST00000088013 5674 ntAPPRIS ALT2 TSL 5 BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Top1mtQ8R4U6 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Timp2-201ENSMUST00000017610 3709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 AC154231.1-201ENSMUST00000220564 2175 ntBASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Prrg4-201ENSMUST00000028593 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm20481-201ENSMUST00000173680 564 ntAPPRIS P1 TSL 3 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm44335-201ENSMUST00000196879 141 ntBASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm2213-201ENSMUST00000197485 688 ntBASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm44297-201ENSMUST00000198304 141 ntBASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm44346-201ENSMUST00000198851 141 ntBASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Chd4-201ENSMUST00000056889 6697 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Marveld3-202ENSMUST00000051430 2447 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Top1mtQ8R4U6 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ffar2-202ENSMUST00000163504 1913 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Lifr-201ENSMUST00000067190 4143 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Gm43125-201ENSMUST00000201724 730 ntBASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 AC131710.1-201ENSMUST00000228336 990 ntBASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Srrm3-204ENSMUST00000144211 3932 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Ssr1-204ENSMUST00000225319 1610 ntBASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC17.17■□□□□ 0.34
Top1mtQ8R4U6 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Trim24-203ENSMUST00000120428 3940 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Gm13015-201ENSMUST00000118674 204 ntBASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
Top1mtQ8R4U6 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 56.3 ms