Protein–RNA interactions for Protein: Q8R4R6

Nup35, Nucleoporin NUP53, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup35Q8R4R6 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Lamc2-201ENSMUST00000027753 5164 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
Nup35Q8R4R6 Cacna2d1-205ENSMUST00000167946 7436 ntAPPRIS ALT1 TSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Trnt1-201ENSMUST00000057578 2283 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Gm8584-201ENSMUST00000171982 758 ntBASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Gm33142-201ENSMUST00000193913 867 ntBASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
Nup35Q8R4R6 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Dmrta1-201ENSMUST00000052478 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Pomt2-201ENSMUST00000037788 5064 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm25990-201ENSMUST00000102440 86 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44357-201ENSMUST00000195897 142 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm19658-201ENSMUST00000196231 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44367-201ENSMUST00000196836 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44350-201ENSMUST00000197197 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44390-201ENSMUST00000197533 144 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44313-201ENSMUST00000198018 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44486-201ENSMUST00000198508 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44314-201ENSMUST00000199263 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44394-201ENSMUST00000199558 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44484-201ENSMUST00000199873 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44466-201ENSMUST00000200264 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm44359-201ENSMUST00000200671 138 ntBASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Ly6k-201ENSMUST00000060301 791 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.53
Nup35Q8R4R6 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Gpr160-207ENSMUST00000166278 1689 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Morn1-201ENSMUST00000030915 1659 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC11.71□□□□□ -0.54
Nup35Q8R4R6 Iqck-202ENSMUST00000106547 2026 ntAPPRIS P2 TSL 5 BASIC11.7□□□□□ -0.54
Nup35Q8R4R6 Umad1-208ENSMUST00000162034 2015 ntAPPRIS ALT2 TSL 3 BASIC11.7□□□□□ -0.54
Nup35Q8R4R6 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Nup35Q8R4R6 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms