Protein–RNA interactions for Protein: Q8R3Q6

Ccdc58, Coiled-coil domain-containing protein 58, mousemouse

Predictions only

Length 144 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc58Q8R3Q6 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Paupar-201ENSMUST00000194826 3482 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm7935-201ENSMUST00000100555 1278 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm11780-201ENSMUST00000136880 516 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm37335-201ENSMUST00000192656 447 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm37584-201ENSMUST00000193595 1290 ntBASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 D530014G21Rik-201ENSMUST00000208416 587 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Col9a3-201ENSMUST00000103059 2846 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Cbx6-202ENSMUST00000109625 3056 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Ccdc58Q8R3Q6 Gm42872-201ENSMUST00000200026 1967 ntBASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Casc4-202ENSMUST00000089912 3602 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Rev3l-201ENSMUST00000019986 10713 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Rcor2-202ENSMUST00000113369 2013 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Celf5-203ENSMUST00000120508 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Trav13-3-201ENSMUST00000117226 336 ntBASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Cmtm5-203ENSMUST00000227441 610 ntBASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Nthl1-201ENSMUST00000047611 1080 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Tigd2-201ENSMUST00000062626 3007 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Ccdc58Q8R3Q6 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Ccdc58Q8R3Q6 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Ccdc58Q8R3Q6 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Snph-202ENSMUST00000094456 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Dusp6-201ENSMUST00000020118 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Colgalt2-201ENSMUST00000044311 4093 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Alkal1-201ENSMUST00000133144 971 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Ankrd39-202ENSMUST00000194894 664 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 AC154471.1-201ENSMUST00000224418 436 ntBASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC12.89□□□□□ -0.35
Ccdc58Q8R3Q6 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms