Protein–RNA interactions for Protein: Q8R1F9

Rpp40, Ribonuclease P protein subunit p40, mousemouse

Predictions only

Length 363 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpp40Q8R1F9 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Gas2l3-207ENSMUST00000220128 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC15.37■□□□□ 0.05
Rpp40Q8R1F9 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm44443-201ENSMUST00000204396 5633 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Ap1g1-202ENSMUST00000093157 6899 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm15957-201ENSMUST00000118893 974 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm6916-202ENSMUST00000205523 195 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Dab2ip-202ENSMUST00000091010 6455 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm12620-201ENSMUST00000119791 1986 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm12612-201ENSMUST00000140182 1986 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Rpp40Q8R1F9 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Gm35911-201ENSMUST00000198837 677 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Rpp40Q8R1F9 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Atp2c2-201ENSMUST00000095171 3222 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Rpp40Q8R1F9 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Retrieved 100 of 76,532 protein–RNA pairs in 30.6 ms