Protein–RNA interactions for Protein: Q8K445

Clrn1, Clarin-1, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn1Q8K445 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Gm44981-201ENSMUST00000205549 1943 ntBASIC13.58□□□□□ -0.24
Clrn1Q8K445 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Clrn1Q8K445 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC13.57□□□□□ -0.24
Clrn1Q8K445 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.57□□□□□ -0.24
Clrn1Q8K445 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Sebox-201ENSMUST00000001130 1351 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Klk10-201ENSMUST00000014058 1373 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Clrn1Q8K445 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC13.57□□□□□ -0.24
Clrn1Q8K445 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Myog-201ENSMUST00000027730 1495 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Rspry1-207ENSMUST00000212729 2800 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Ppil3-202ENSMUST00000114345 1175 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Mir6990-201ENSMUST00000183724 91 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm44335-201ENSMUST00000196879 141 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm44297-201ENSMUST00000198304 141 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 AC151286.1-201ENSMUST00000198489 145 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm44346-201ENSMUST00000198851 141 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm43125-201ENSMUST00000201724 730 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.56□□□□□ -0.24
Clrn1Q8K445 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Clrn1Q8K445 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.55□□□□□ -0.24
Clrn1Q8K445 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Tex22-202ENSMUST00000109729 735 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.55□□□□□ -0.24
Clrn1Q8K445 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Tmem204-201ENSMUST00000024984 1846 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Zfp90-203ENSMUST00000212606 2685 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Clrn1Q8K445 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Clrn1Q8K445 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 77.3 ms