Protein–RNA interactions for Protein: Q8CII8

Syne4, Nesprin-4, mousemouse

Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syne4Q8CII8 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Oaz1-207ENSMUST00000180036 1044 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 C430014B12Rik-201ENSMUST00000181720 1001 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm37714-201ENSMUST00000194742 342 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm19078-201ENSMUST00000206311 727 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 AC159896.2-201ENSMUST00000214753 269 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 AC154319.1-201ENSMUST00000216330 312 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm867-202ENSMUST00000219979 714 ntAPPRIS P1 TSL 3 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 AL589735.1-201ENSMUST00000224353 270 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm6091-201ENSMUST00000098307 165 ntBASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm4219-201ENSMUST00000168140 2143 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Syne4Q8CII8 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Rsf1os2-203ENSMUST00000155074 998 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Gm12057-202ENSMUST00000189990 882 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Gm44974-201ENSMUST00000206387 1279 ntBASIC16.15■□□□□ 0.18
Syne4Q8CII8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Myod1-201ENSMUST00000072514 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Acsl3-205ENSMUST00000142704 2976 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Myrf-202ENSMUST00000186056 3636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Pcdhgc4-203ENSMUST00000195239 2272 ntTSL 3 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Syne4Q8CII8 Dvl2-207ENSMUST00000190940 5037 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.18
Syne4Q8CII8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Hnrnpll-205ENSMUST00000184635 3009 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Mir1247-201ENSMUST00000116706 82 ntBASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gm11524-201ENSMUST00000119349 807 ntBASIC16.14■□□□□ 0.17
Syne4Q8CII8 Myadml2os-201ENSMUST00000126642 1044 ntTSL 5 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Olfr569-201ENSMUST00000078191 945 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Olfr582-201ENSMUST00000098212 960 ntBASIC16.14■□□□□ 0.17
Syne4Q8CII8 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gm38037-201ENSMUST00000192600 1624 ntBASIC16.14■□□□□ 0.17
Syne4Q8CII8 Lca5l-202ENSMUST00000113804 3162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Dtx2-203ENSMUST00000111144 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Ube2d3-202ENSMUST00000166033 2504 ntAPPRIS P2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gm26578-201ENSMUST00000181702 4611 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Syne4Q8CII8 Gnas-211ENSMUST00000109096 2465 ntTSL 1 (best) BASIC16.13■□□□□ 0.17
Syne4Q8CII8 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC16.13■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms