Protein–RNA interactions for Protein: Q8C8C1

Rtp1, Receptor-transporting protein 1, mousemouse

Predictions only

Length 263 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rtp1Q8C8C1 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm8775-201ENSMUST00000170943 1327 ntBASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm23931-201ENSMUST00000103842 109 ntBASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Inca1-203ENSMUST00000108542 1080 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm10863-205ENSMUST00000148028 905 ntTSL 3 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm6460-202ENSMUST00000163787 821 ntAPPRIS P2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm8879-201ENSMUST00000170260 1125 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 4933402N22Rik-202ENSMUST00000170301 1092 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Txnl4b-202ENSMUST00000178445 830 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm8565-201ENSMUST00000183259 1014 ntBASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm27243-201ENSMUST00000183964 521 ntBASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm29649-201ENSMUST00000185649 419 ntBASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Acap3-202ENSMUST00000105584 4365 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
Rtp1Q8C8C1 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Zpbp-201ENSMUST00000020413 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Spata3-202ENSMUST00000113344 1047 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Gm5187-201ENSMUST00000117317 991 ntBASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Gm15429-201ENSMUST00000151268 798 ntBASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Gm38241-201ENSMUST00000192641 898 ntBASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 AC126253.1-201ENSMUST00000227974 824 ntBASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Skor1-203ENSMUST00000119146 3610 ntAPPRIS ALT2 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC16.28■□□□□ 0.2
Rtp1Q8C8C1 Tcf3-204ENSMUST00000105340 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Gm12928-201ENSMUST00000117115 573 ntBASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 E130006D01Rik-203ENSMUST00000137398 906 ntTSL 2 BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Gm16136-203ENSMUST00000162520 1121 ntTSL 2 BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Gm9726-201ENSMUST00000180321 678 ntBASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Gm5370-201ENSMUST00000187187 574 ntBASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 CT485787.1-201ENSMUST00000225617 968 ntBASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
Rtp1Q8C8C1 Tmem200c-201ENSMUST00000178545 3213 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Lingo3-201ENSMUST00000053986 3439 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Ifi47-204ENSMUST00000213728 1678 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Cadps2-201ENSMUST00000018122 4723 ntAPPRIS P3 TSL 5 BASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC16.27■□□□□ 0.19
Rtp1Q8C8C1 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Arf1-201ENSMUST00000061242 1800 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Coch-202ENSMUST00000164782 2681 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Dctn4-202ENSMUST00000223590 1530 ntBASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Slc25a22-201ENSMUST00000019226 2811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Rtp1Q8C8C1 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
Retrieved 100 of 76,532 protein–RNA pairs in 36.4 ms