Protein–RNA interactions for Protein: Q8C7M3

Trim9, E3 ubiquitin-protein ligase TRIM9, mousemouse

Predictions only

Length 817 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim9Q8C7M3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.85■□□□□ 0.13
Trim9Q8C7M3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Adamts17-202ENSMUST00000107478 6416 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Galnt13-202ENSMUST00000112634 7639 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Paxx-201ENSMUST00000114261 981 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Fam71e1-204ENSMUST00000205422 366 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC15.84■□□□□ 0.13
Trim9Q8C7M3 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim9Q8C7M3 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim9Q8C7M3 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim9Q8C7M3 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Trim9Q8C7M3 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Nek1-202ENSMUST00000120689 5478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 1190007I07Rik-203ENSMUST00000183363 406 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Gm2756-201ENSMUST00000195851 400 ntBASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Gm2213-201ENSMUST00000197485 688 ntBASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Gm18049-201ENSMUST00000208909 581 ntBASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Lce3b-201ENSMUST00000046234 562 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 1190007I07Rik-201ENSMUST00000079648 716 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Suv39h2-201ENSMUST00000027956 4327 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Trim9Q8C7M3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Efs-201ENSMUST00000022813 2705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22065-201ENSMUST00000103753 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22066-201ENSMUST00000103761 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24932-201ENSMUST00000103763 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24115-201ENSMUST00000103799 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22190-201ENSMUST00000103827 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22191-201ENSMUST00000103831 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24721-201ENSMUST00000103849 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm28018-201ENSMUST00000103869 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm26399-201ENSMUST00000103937 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm13823-201ENSMUST00000119930 345 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm25349-201ENSMUST00000177728 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm23616-201ENSMUST00000177797 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm25871-201ENSMUST00000177816 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24752-201ENSMUST00000178240 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm24496-201ENSMUST00000178287 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm25649-201ENSMUST00000178476 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm25548-201ENSMUST00000178681 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm23147-201ENSMUST00000178841 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm26095-201ENSMUST00000179270 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22171-201ENSMUST00000179283 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm23936-201ENSMUST00000179354 110 ntBASIC15.82■□□□□ 0.12
Trim9Q8C7M3 Gm22619-201ENSMUST00000179516 110 ntBASIC15.82■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 51.7 ms