Protein–RNA interactions for Protein: Q8C6K9

Col6a6, Collagen alpha-6(VI) chain, mousemouse

Predictions only

Length 2,265 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a6Q8C6K9 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Pigyl-202ENSMUST00000148088 676 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 AC144543.1-201ENSMUST00000221840 1064 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Rasgrp2-201ENSMUST00000035716 2219 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Scyl1-201ENSMUST00000025890 2637 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Col6a6Q8C6K9 Dmgdh-201ENSMUST00000048001 2992 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Eogt-202ENSMUST00000113387 701 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Mup-ps23-201ENSMUST00000118063 630 ntBASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm15945-201ENSMUST00000146755 810 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm18054-201ENSMUST00000207539 555 ntBASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm9182-201ENSMUST00000217829 639 ntBASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Spag8-202ENSMUST00000107870 1342 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Mvk-202ENSMUST00000112239 1602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Acbd5-215ENSMUST00000228050 4804 ntAPPRIS ALT2 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gch1-201ENSMUST00000089959 2775 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm23931-201ENSMUST00000103842 109 ntBASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Ifnar2-203ENSMUST00000117836 1099 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm13562-201ENSMUST00000125198 797 ntTSL 2 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm6916-202ENSMUST00000205523 195 ntBASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Cyb5r3-201ENSMUST00000018186 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Retsat-205ENSMUST00000176364 1647 ntTSL 5 BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 4930431F12Rik-202ENSMUST00000199309 2263 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Cdca7l-201ENSMUST00000021592 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Col6a6Q8C6K9 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 2210011K15Rik-201ENSMUST00000190690 1741 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Aire-216ENSMUST00000156417 1627 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Nudt1-203ENSMUST00000110825 599 ntTSL 2 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 AC122459.1-201ENSMUST00000228373 885 ntBASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Dnajc5g-201ENSMUST00000066544 1565 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Gm36445-201ENSMUST00000209344 1432 ntTSL 5 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Fgf2-208ENSMUST00000200585 5973 ntAPPRIS P2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Rasgrp1-201ENSMUST00000102534 5229 ntAPPRIS P1 TSL 5 BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 4921539H07Rik-202ENSMUST00000200072 1665 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Col6a6Q8C6K9 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Gm24196-201ENSMUST00000179161 110 ntBASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Gm17795-201ENSMUST00000214505 757 ntBASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 AC154806.6-201ENSMUST00000228192 202 ntBASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Gm8973-201ENSMUST00000079818 315 ntAPPRIS P1 BASIC12.9□□□□□ -0.35
Col6a6Q8C6K9 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Col6a6Q8C6K9 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms