Protein–RNA interactions for Protein: Q8C2A2

Tsen54, tRNA-splicing endonuclease subunit Sen54, mousemouse

Predictions only

Length 525 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tsen54Q8C2A2 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 1700016B15Rik-201ENSMUST00000209027 733 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 4930428E07Rik-201ENSMUST00000222132 920 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 AC160980.1-201ENSMUST00000224136 970 ntBASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gm38392-202ENSMUST00000165196 1303 ntAPPRIS P5 TSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Gli2-201ENSMUST00000062483 6637 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Fn1-211ENSMUST00000187938 7965 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Nek8-201ENSMUST00000017549 2809 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Itga6-202ENSMUST00000112101 4156 ntAPPRIS ALT1 TSL 5 BASIC12.04□□□□□ -0.48
Tsen54Q8C2A2 Xrcc3-201ENSMUST00000021715 2422 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Lamp2-203ENSMUST00000074913 2184 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm21009-201ENSMUST00000197169 1669 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Zfp358-203ENSMUST00000208423 2200 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Kctd20-203ENSMUST00000118762 3839 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Celf4-206ENSMUST00000224553 1729 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Paox-201ENSMUST00000026537 4655 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Pcdh19-202ENSMUST00000149154 10289 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm13884-201ENSMUST00000118103 829 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm21887-203ENSMUST00000180251 531 ntAPPRIS P5 TSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm4535-201ENSMUST00000182274 558 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44357-201ENSMUST00000195897 142 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm19658-201ENSMUST00000196231 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44367-201ENSMUST00000196836 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44350-201ENSMUST00000197197 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44390-201ENSMUST00000197533 144 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44313-201ENSMUST00000198018 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44486-201ENSMUST00000198508 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44314-201ENSMUST00000199263 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44394-201ENSMUST00000199558 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44484-201ENSMUST00000199873 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44466-201ENSMUST00000200264 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm44359-201ENSMUST00000200671 138 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 D530033B14Rik-201ENSMUST00000205412 546 ntTSL 5 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm6296-201ENSMUST00000222599 943 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm10355-201ENSMUST00000097146 517 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Zfp142-203ENSMUST00000113737 7473 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Gm18856-201ENSMUST00000178096 1374 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Amn1-201ENSMUST00000095319 1369 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Ptpru-203ENSMUST00000105987 5484 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 Acot6-202ENSMUST00000222921 3622 ntBASIC12.03□□□□□ -0.48
Tsen54Q8C2A2 AC126250.1-201ENSMUST00000228343 1768 ntBASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Tsen54Q8C2A2 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Gm18195-201ENSMUST00000207604 706 ntBASIC12.02□□□□□ -0.49
Tsen54Q8C2A2 Gm18622-201ENSMUST00000219361 595 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 26.3 ms