Protein–RNA interactions for Protein: Q8C0Y0

Ppp4r4, Serine/threonine-protein phosphatase 4 regulatory subunit 4, mousemouse

Predictions only

Length 875 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ppp4r4Q8C0Y0 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Bag6-201ENSMUST00000025250 3858 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
Ppp4r4Q8C0Y0 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Flrt2-202ENSMUST00000110117 3223 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Ccny-201ENSMUST00000053917 4017 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Btf3-204ENSMUST00000134542 780 ntAPPRIS P1 TSL 2 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm5628-201ENSMUST00000222318 1049 ntBASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Chchd1-203ENSMUST00000224633 557 ntBASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Tmub1-201ENSMUST00000030799 1333 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm45133-201ENSMUST00000207548 2773 ntBASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC14.55□□□□□ -0.08
Ppp4r4Q8C0Y0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Eif5b-201ENSMUST00000027252 7797 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm14701-201ENSMUST00000117156 348 ntBASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm44662-201ENSMUST00000206970 412 ntTSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm45612-201ENSMUST00000211320 160 ntBASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Trem2-201ENSMUST00000024791 1088 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 3110079O15Rik-201ENSMUST00000027476 478 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Zfp410-201ENSMUST00000045931 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Bcl11a-202ENSMUST00000109514 5989 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Ppp4r4Q8C0Y0 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Ppp4r4Q8C0Y0 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Retrieved 100 of 76,532 protein–RNA pairs in 40.5 ms