Protein–RNA interactions for Protein: Q8C0E3

Trim47, Tripartite motif-containing protein 47, mousemouse

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim47Q8C0E3 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm46209-201ENSMUST00000217912 553 ntBASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Gm45504-201ENSMUST00000211407 2107 ntBASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Islr2-210ENSMUST00000215950 4109 ntAPPRIS P3 TSL 1 (best) BASIC15.92■□□□□ 0.14
Trim47Q8C0E3 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Gm23547-201ENSMUST00000158210 271 ntBASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 AA619741-201ENSMUST00000195095 646 ntBASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Gtf2h1-201ENSMUST00000006774 2736 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Elovl1-207ENSMUST00000167636 1340 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
Trim47Q8C0E3 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Dnajc5-202ENSMUST00000108796 934 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Mir8102-201ENSMUST00000184148 139 ntBASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Gm43703-201ENSMUST00000200523 763 ntBASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Luc7l3-201ENSMUST00000021226 3373 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Trim47Q8C0E3 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 AC124751.1-201ENSMUST00000222716 1408 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm15653-201ENSMUST00000119247 907 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm12882-201ENSMUST00000121696 517 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm15487-201ENSMUST00000122373 465 ntBASIC15.89■□□□□ 0.13
Trim47Q8C0E3 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Gm14493-201ENSMUST00000141174 543 ntTSL 5 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 2010015M23Rik-201ENSMUST00000181900 1199 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Trim47Q8C0E3 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.89■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms