Protein–RNA interactions for Protein: Q8C0D0

Trub1, Probable tRNA pseudouridine synthase 1, mousemouse

Known RBP Predictions only

Length 338 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trub1Q8C0D0 Cdk18-201ENSMUST00000027697 4355 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm996-203ENSMUST00000188161 2925 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Prss45-202ENSMUST00000146794 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Cdipt-205ENSMUST00000206450 951 ntTSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Eif5a-203ENSMUST00000071026 1286 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Clcnka-201ENSMUST00000042617 2428 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Gm5763-201ENSMUST00000155951 1530 ntBASIC14.82□□□□□ -0.04
Trub1Q8C0D0 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm13015-201ENSMUST00000118674 204 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm14822-201ENSMUST00000122247 291 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Evx1-202ENSMUST00000129243 1034 ntTSL 3 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm24513-201ENSMUST00000174964 138 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Mir6990-201ENSMUST00000183724 91 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm29310-201ENSMUST00000185468 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21825-201ENSMUST00000185728 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm29109-201ENSMUST00000185895 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21896-201ENSMUST00000186520 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21873-201ENSMUST00000186728 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21794-201ENSMUST00000187056 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21880-201ENSMUST00000187275 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21826-201ENSMUST00000187451 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21198-201ENSMUST00000188393 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21749-201ENSMUST00000189343 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21901-201ENSMUST00000189568 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm29424-201ENSMUST00000189716 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm28599-201ENSMUST00000189838 694 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21867-201ENSMUST00000189917 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm29269-201ENSMUST00000190087 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21722-201ENSMUST00000190153 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm28423-201ENSMUST00000190701 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21899-201ENSMUST00000190745 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21910-201ENSMUST00000191163 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21849-201ENSMUST00000191571 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm28678-201ENSMUST00000191593 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm20910-201ENSMUST00000193268 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Gm21871-201ENSMUST00000194621 696 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 AC131710.1-201ENSMUST00000228336 990 ntBASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Txndc11-203ENSMUST00000118679 3523 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Hsd17b7-202ENSMUST00000111353 1446 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trub1Q8C0D0 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Sass6-205ENSMUST00000198311 2404 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC14.8□□□□□ -0.04
Trub1Q8C0D0 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29.3 ms