Protein–RNA interactions for Protein: Q8BX13

Ube3d, E3 ubiquitin-protein ligase E3D, mousemouse

Predictions only

Length 368 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube3dQ8BX13 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Ndufs6-204ENSMUST00000223293 757 ntTSL 2 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Rgs14-201ENSMUST00000063771 2356 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Ube3dQ8BX13 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Insr-201ENSMUST00000091291 9355 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Ghr-201ENSMUST00000069451 4175 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Rbsn-201ENSMUST00000014694 5334 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Ube3dQ8BX13 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Med28-202ENSMUST00000118833 734 ntTSL 2 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Gm11788-201ENSMUST00000142520 562 ntTSL 3 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Nnat-209ENSMUST00000173793 386 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Gm43474-201ENSMUST00000196415 774 ntBASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Gm43125-201ENSMUST00000201724 730 ntBASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Gm18057-201ENSMUST00000208220 503 ntBASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Lin37-201ENSMUST00000043975 998 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Hcrt-201ENSMUST00000055083 586 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Arhgef25-202ENSMUST00000167353 2189 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Slc7a15-204ENSMUST00000165657 1467 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Slc7a15-202ENSMUST00000095863 1467 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Cobll1-201ENSMUST00000090896 4867 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC12.77□□□□□ -0.37
Ube3dQ8BX13 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Slc39a11-202ENSMUST00000071539 2664 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Mpp3-201ENSMUST00000062801 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Gm16026-204ENSMUST00000162652 683 ntBASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 1190007I07Rik-204ENSMUST00000183416 637 ntTSL 2 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Nckipsd-206ENSMUST00000195323 467 ntTSL 3 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Irs3-202ENSMUST00000196511 1281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC12.76□□□□□ -0.37
Ube3dQ8BX13 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms