Protein–RNA interactions for Protein: Q8BTW8

Cdk5rap1, CDK5 regulatory subunit-associated protein 1, mousemouse

Predictions only

Length 588 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdk5rap1Q8BTW8 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm42632-201ENSMUST00000201707 2411 ntBASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Gm37736-201ENSMUST00000193564 2802 ntBASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC13.65□□□□□ -0.22
Cdk5rap1Q8BTW8 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Cdk5rap1Q8BTW8 BC001981-202ENSMUST00000191393 1545 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm5357-201ENSMUST00000212720 1924 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm13111-201ENSMUST00000136217 3542 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Atg9a-208ENSMUST00000189702 4110 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm13127-201ENSMUST00000118978 1389 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 1700028E10Rik-205ENSMUST00000202024 924 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm9229-201ENSMUST00000222777 126 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 AC238811.1-201ENSMUST00000225302 441 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Edem3-202ENSMUST00000187951 3115 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Cdk5rap1Q8BTW8 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm28050-201ENSMUST00000124394 449 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm43703-201ENSMUST00000200523 763 ntBASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 AC121598.1-201ENSMUST00000228224 1019 ntBASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Rpl28-201ENSMUST00000032597 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm38058-201ENSMUST00000194323 4368 ntBASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Uck2-202ENSMUST00000053686 4731 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Hars-201ENSMUST00000001416 1987 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Pebp1-202ENSMUST00000111973 779 ntTSL 3 BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC13.62□□□□□ -0.23
Cdk5rap1Q8BTW8 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 10.9 ms