Protein–RNA interactions for Protein: Q8BTS4

Nup54, Nuclear pore complex protein Nup54, mousemouse

Known RBP Predictions only

Length 510 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nup54Q8BTS4 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Gm37297-201ENSMUST00000192974 2384 ntBASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Vldlr-208ENSMUST00000172302 3855 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Rnf44-211ENSMUST00000134862 3797 ntTSL 5 BASIC14.7□□□□□ -0.06
Nup54Q8BTS4 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Ralgds-201ENSMUST00000028170 3590 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm15957-201ENSMUST00000118893 974 ntBASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Haghl-203ENSMUST00000133071 1128 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm10576-201ENSMUST00000191927 825 ntBASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm10747-201ENSMUST00000217799 1014 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gm9063-201ENSMUST00000223299 582 ntBASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC14.69□□□□□ -0.06
Nup54Q8BTS4 Chdh-201ENSMUST00000067620 5690 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Mansc4-202ENSMUST00000123367 542 ntAPPRIS ALT2 TSL 2 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gm27321-201ENSMUST00000185021 205 ntBASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gm20949-201ENSMUST00000206478 952 ntBASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Hectd2-201ENSMUST00000047247 4731 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Nat8f7-201ENSMUST00000160534 1822 ntAPPRIS P1 TSL 5 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gm45605-201ENSMUST00000210265 4269 ntBASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Ispd-202ENSMUST00000220519 3122 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Rtn4-201ENSMUST00000060992 1773 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Nup54Q8BTS4 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Gm5320-201ENSMUST00000207163 1519 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC14.67□□□□□ -0.06
Nup54Q8BTS4 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 44.5 ms