Protein–RNA interactions for Protein: Q8BRE0

Rd3, Protein RD3, mousemouse

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rd3Q8BRE0 Gm45059-201ENSMUST00000205558 1077 ntBASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Crybb3-201ENSMUST00000076069 816 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Dhx9-201ENSMUST00000042141 4616 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Ptp4a2-207ENSMUST00000165853 3382 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Stambp-206ENSMUST00000206400 2144 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Rd3Q8BRE0 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gm11478-201ENSMUST00000117851 599 ntBASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gm7820-201ENSMUST00000121012 1052 ntBASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gnb2-209ENSMUST00000143495 1285 ntTSL 5 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gm31326-201ENSMUST00000191856 1048 ntBASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Ighv1-25-201ENSMUST00000195638 345 ntBASIC15.21■□□□□ 0.03
Rd3Q8BRE0 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Wac-215ENSMUST00000171042 2205 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Rd3Q8BRE0 Taco1-201ENSMUST00000002048 1383 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Sirt5-207ENSMUST00000221515 1793 ntTSL 5 BASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Rd3Q8BRE0 Tmem87b-201ENSMUST00000110325 4807 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Cgn-202ENSMUST00000107273 5016 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Pmvk-202ENSMUST00000107410 652 ntTSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm15393-201ENSMUST00000120499 219 ntBASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm21854-201ENSMUST00000179901 471 ntBASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Gm15823-201ENSMUST00000064305 670 ntBASIC15.2■□□□□ 0.02
Rd3Q8BRE0 BC001981-202ENSMUST00000191393 1545 ntBASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Rd3Q8BRE0 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm9115-201ENSMUST00000120192 1348 ntBASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Syt8-201ENSMUST00000097939 1300 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm26560-201ENSMUST00000181240 2619 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Cdk5r1-201ENSMUST00000053413 4162 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm5763-201ENSMUST00000155951 1530 ntBASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Rd3Q8BRE0 Gm15460-201ENSMUST00000118147 391 ntBASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 37.6 ms