Protein–RNA interactions for Protein: Q8BQZ5

Cpsf4, Cleavage and polyadenylation specificity factor subunit 4, mousemouse

Known RBP Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf4Q8BQZ5 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Nhs-202ENSMUST00000087085 8805 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm37912-201ENSMUST00000191895 3076 ntBASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm26308-201ENSMUST00000157768 69 ntBASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm27494-201ENSMUST00000184735 189 ntBASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 9430081H08Rik-201ENSMUST00000217460 818 ntBASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Fasn-201ENSMUST00000055655 10050 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Kdm2b-201ENSMUST00000031435 3532 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
Cpsf4Q8BQZ5 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4Q8BQZ5 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC13.96□□□□□ -0.18
Cpsf4Q8BQZ5 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4Q8BQZ5 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4Q8BQZ5 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
Cpsf4Q8BQZ5 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Ercc8-202ENSMUST00000120672 1144 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Crygn-201ENSMUST00000047119 768 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Cpsf4Q8BQZ5 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Cep250-203ENSMUST00000109618 1254 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Ralgapb-203ENSMUST00000109486 8383 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Atp9b-213ENSMUST00000225980 5150 ntAPPRIS P2 BASIC13.94□□□□□ -0.18
Cpsf4Q8BQZ5 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC13.93□□□□□ -0.18
Cpsf4Q8BQZ5 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 53.1 ms