Protein–RNA interactions for Protein: Q8BJF9

Chmp2b, Charged multivesicular body protein 2b, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp2bQ8BJF9 Tsacc-202ENSMUST00000107556 584 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Mir5131-201ENSMUST00000175426 93 ntBASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 AC130671.1-201ENSMUST00000227384 1237 ntBASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 AC122901.1-201ENSMUST00000214203 1790 ntBASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Ccp110-202ENSMUST00000106557 5073 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Chmp2bQ8BJF9 Matn2-206ENSMUST00000228570 2798 ntBASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Ube3b-201ENSMUST00000074002 5194 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Snhg15-203ENSMUST00000134527 675 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Olfr286-202ENSMUST00000205305 969 ntBASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Cnih4-203ENSMUST00000111059 3127 ntTSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
Chmp2bQ8BJF9 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gm11873-201ENSMUST00000117877 1304 ntBASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gm28659-201ENSMUST00000188013 759 ntBASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Crb3-201ENSMUST00000071826 1194 ntAPPRIS P3 TSL 3 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
Chmp2bQ8BJF9 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
Chmp2bQ8BJF9 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.71□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 28.5 ms