Protein–RNA interactions for Protein: Q8BHH8

Clrn3, Clarin-3, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn3Q8BHH8 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Rnf150-201ENSMUST00000078525 9682 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Clrn3Q8BHH8 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Sec61a2-209ENSMUST00000193792 2110 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Mef2b-204ENSMUST00000110146 1342 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Trim34a-202ENSMUST00000106848 2043 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
Clrn3Q8BHH8 Gm16976-201ENSMUST00000099718 1894 ntTSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Cdkn1a-203ENSMUST00000122348 857 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 CT030684.1-201ENSMUST00000227292 914 ntBASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Gpr146-202ENSMUST00000053120 1040 ntBASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Atad3aos-201ENSMUST00000067628 971 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Gpr4-201ENSMUST00000060225 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
Clrn3Q8BHH8 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Zeb2-211ENSMUST00000153561 2070 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 D630014O11Rik-201ENSMUST00000160562 3019 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Mbnl2-204ENSMUST00000227012 2390 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm2451-201ENSMUST00000199447 999 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm10290-201ENSMUST00000200451 999 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Mt3-201ENSMUST00000034211 536 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Gm15500-202ENSMUST00000071641 1019 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Lsmem1-201ENSMUST00000095760 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Nrn1-204ENSMUST00000224323 1779 ntBASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Pqlc2-202ENSMUST00000105801 2756 ntAPPRIS ALT2 TSL 2 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Clrn3Q8BHH8 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms