Protein–RNA interactions for Protein: Q8BGY9

Slc5a7, High affinity choline transporter 1, mousemouse

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc5a7Q8BGY9 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Slc5a7Q8BGY9 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Slc5a7Q8BGY9 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.39
Slc5a7Q8BGY9 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.39
Slc5a7Q8BGY9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Dpysl4-202ENSMUST00000121184 2727 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Kifc3-202ENSMUST00000169353 2898 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Shc3-203ENSMUST00000223543 1241 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
Slc5a7Q8BGY9 AC130669.1-201ENSMUST00000228537 1672 ntBASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Nfatc4-201ENSMUST00000024179 3267 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Angel2-203ENSMUST00000110899 3673 ntTSL 5 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Lrig2-205ENSMUST00000198332 3946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gm11185-201ENSMUST00000117732 1007 ntBASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gm18489-201ENSMUST00000172565 551 ntBASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 4930445N18Rik-202ENSMUST00000181345 1033 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Lsm1-203ENSMUST00000211168 343 ntTSL 3 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Ncbp1-201ENSMUST00000030014 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Abi1-201ENSMUST00000078977 3027 ntAPPRIS ALT1 TSL 5 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Gm15889-202ENSMUST00000212669 2443 ntBASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Reck-201ENSMUST00000030198 4433 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Kansl3-205ENSMUST00000186470 2801 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
Slc5a7Q8BGY9 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Morc4-202ENSMUST00000087401 3862 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Naa10-206ENSMUST00000114391 834 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Gm25016-201ENSMUST00000158399 131 ntBASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Cxxc4-201ENSMUST00000166288 1290 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Gm27742-201ENSMUST00000184667 60 ntBASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 AC108846.1-201ENSMUST00000214531 513 ntBASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Fgf8-201ENSMUST00000026240 1117 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Slc5a7Q8BGY9 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.56□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms