Protein–RNA interactions for Protein: Q8BGD7

Npas4, Neuronal PAS domain-containing protein 4, mousemouse

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Npas4Q8BGD7 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Gm17794-201ENSMUST00000220252 955 ntBASIC15.06■□□□□ 0
Npas4Q8BGD7 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Hmgb1-202ENSMUST00000093196 1092 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Zfp553-201ENSMUST00000056232 3043 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Gm3139-202ENSMUST00000201138 1303 ntTSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Gm3183-203ENSMUST00000202911 1303 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Sgce-207ENSMUST00000126151 1522 ntTSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Gm26882-201ENSMUST00000181611 1537 ntTSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Rtn1-202ENSMUST00000078505 3629 ntTSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
Npas4Q8BGD7 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
Npas4Q8BGD7 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ 0
Npas4Q8BGD7 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC15.05■□□□□ 0
Npas4Q8BGD7 Six1-201ENSMUST00000050029 3316 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Gm6244-201ENSMUST00000178732 841 ntBASIC15.05■□□□□ -0
Npas4Q8BGD7 Gm29481-201ENSMUST00000189080 1049 ntTSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Gm44799-201ENSMUST00000207639 1202 ntBASIC15.05■□□□□ -0
Npas4Q8BGD7 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Elane-201ENSMUST00000046091 984 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC15.05■□□□□ -0
Npas4Q8BGD7 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC15.05■□□□□ -0
Npas4Q8BGD7 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Gm37305-201ENSMUST00000195714 4279 ntBASIC15.05■□□□□ -0
Npas4Q8BGD7 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
Npas4Q8BGD7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Npr3-201ENSMUST00000066529 6892 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 AC114008.2-201ENSMUST00000227699 1347 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 Gm5303-201ENSMUST00000117943 1252 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Mir1894-201ENSMUST00000122802 81 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 1700037F24Rik-201ENSMUST00000181254 973 ntTSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Gm43630-201ENSMUST00000201550 776 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Gm18027-201ENSMUST00000218947 619 ntBASIC15.04■□□□□ -0
Npas4Q8BGD7 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Npas4Q8BGD7 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Syk-203ENSMUST00000120135 5363 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
Npas4Q8BGD7 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC15.03■□□□□ -0
Npas4Q8BGD7 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC15.03■□□□□ -0
Npas4Q8BGD7 Dlgap4-204ENSMUST00000109566 1595 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
Retrieved 100 of 76,532 protein–RNA pairs in 36.5 ms