Protein–RNA interactions for Protein: Q80ZI1

Trnp1, TMF-regulated nuclear protein 1, mousemouse

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trnp1Q80ZI1 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Agbl5-208ENSMUST00000201168 3199 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Grb7-201ENSMUST00000019456 2397 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
Trnp1Q80ZI1 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Spdef-202ENSMUST00000114870 2070 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 4930429P21Rik-202ENSMUST00000194547 2061 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Gm11803-201ENSMUST00000119966 444 ntBASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 1600014C10Rik-203ENSMUST00000177983 403 ntTSL 2 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Ighv1-51-201ENSMUST00000192903 354 ntBASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Gm18473-201ENSMUST00000220543 868 ntBASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 AC153144.2-201ENSMUST00000221766 451 ntTSL 5 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Krtcap2-201ENSMUST00000040888 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Gm17383-201ENSMUST00000078739 1041 ntBASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
Trnp1Q80ZI1 Ankra2-208ENSMUST00000226100 1476 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Foxq1-201ENSMUST00000042118 4843 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm12050-201ENSMUST00000127483 615 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm18827-201ENSMUST00000188341 790 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm9124-201ENSMUST00000191789 1092 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm9113-201ENSMUST00000192510 1018 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm9131-201ENSMUST00000193557 1089 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm9121-201ENSMUST00000193749 1071 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Gm19309-201ENSMUST00000218295 205 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 AC166997.1-201ENSMUST00000225122 572 ntBASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Exosc7-201ENSMUST00000026891 1053 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Atpif1-201ENSMUST00000067496 539 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Kir3dl1-202ENSMUST00000113105 1544 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Dnajc25-201ENSMUST00000095070 4023 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
Trnp1Q80ZI1 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Klhl42-201ENSMUST00000036003 6267 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Phyhip-201ENSMUST00000003561 2838 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Tmem254b-202ENSMUST00000100806 1108 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Tmem254a-201ENSMUST00000100811 1108 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Cabp5-202ENSMUST00000117400 1258 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Fbxw4-209ENSMUST00000162433 789 ntTSL 3 BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Gm45880-201ENSMUST00000213041 853 ntBASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Mdk-201ENSMUST00000028672 1054 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
Trnp1Q80ZI1 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Shmt2-201ENSMUST00000026470 2289 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Gm14780-201ENSMUST00000118387 2737 ntBASIC16.02■□□□□ 0.15
Trnp1Q80ZI1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.15
Retrieved 100 of 76,532 protein–RNA pairs in 52.7 ms