Protein–RNA interactions for Protein: Q80XU3

Nucks1, Nuclear ubiquitous casein and cyclin-dependent kinase substrate 1, mousemouse

Known RBP Predictions only

Length 234 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nucks1Q80XU3 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Fau-202ENSMUST00000178310 571 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Gm5364-201ENSMUST00000216789 889 ntBASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Gm45779-201ENSMUST00000212189 4064 ntBASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Leng9-201ENSMUST00000058358 2460 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC15.36■□□□□ 0.05
Nucks1Q80XU3 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Apaf1-201ENSMUST00000020157 6577 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Gm27244-201ENSMUST00000184260 380 ntTSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Gm44492-201ENSMUST00000197012 141 ntBASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Bpifa3-201ENSMUST00000028984 1107 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Pmf1-201ENSMUST00000056370 1007 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Mdfic-203ENSMUST00000125326 3635 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 AC131586.3-201ENSMUST00000228355 1367 ntBASIC15.35■□□□□ 0.05
Nucks1Q80XU3 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
Nucks1Q80XU3 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gm12892-201ENSMUST00000117367 1146 ntBASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Cyhr1-204ENSMUST00000177359 1110 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Nutf2-201ENSMUST00000008594 948 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Mtrr-209ENSMUST00000223398 3861 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Nucks1Q80XU3 AC166574.6-201ENSMUST00000227889 1806 ntBASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 2410018L13Rik-205ENSMUST00000149246 3370 ntTSL 2 BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC15.33■□□□□ 0.05
Nucks1Q80XU3 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Skida1-202ENSMUST00000091420 4376 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Kif7-204ENSMUST00000184137 4093 ntAPPRIS P3 TSL 5 BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Cep170b-204ENSMUST00000220627 5395 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
Nucks1Q80XU3 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms