Protein–RNA interactions for Protein: Q80XC3

Usp6nl, USP6 N-terminal-like protein, mousemouse

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp6nlQ80XC3 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.84■□□□□ 0.13
Usp6nlQ80XC3 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp6nlQ80XC3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.83■□□□□ 0.13
Usp6nlQ80XC3 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.13
Usp6nlQ80XC3 BC037039-201ENSMUST00000192003 2205 ntBASIC15.83■□□□□ 0.13
Usp6nlQ80XC3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Zfp703-202ENSMUST00000154256 3152 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Cpne8-201ENSMUST00000014777 697 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Cenpa-206ENSMUST00000149759 346 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Zfp936-202ENSMUST00000200973 578 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Tmem179-202ENSMUST00000222836 521 ntTSL 5 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Fbxl8-201ENSMUST00000036221 1901 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm14780-201ENSMUST00000118387 2737 ntBASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm43598-201ENSMUST00000202482 2479 ntBASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
Usp6nlQ80XC3 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Apoa5-201ENSMUST00000034584 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Gm17409-201ENSMUST00000167423 962 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Mir7654-201ENSMUST00000185082 70 ntBASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Gm28911-201ENSMUST00000188837 117 ntBASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Gm7558-201ENSMUST00000193221 1165 ntBASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Nkd2-202ENSMUST00000118096 2801 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Coro6-205ENSMUST00000108391 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Ubn1-201ENSMUST00000052449 6455 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
Usp6nlQ80XC3 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Tpm2-202ENSMUST00000107913 2098 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Gm15957-201ENSMUST00000118893 974 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Gm15824-201ENSMUST00000119516 955 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Rpsa-ps9-201ENSMUST00000120702 885 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Gm21470-201ENSMUST00000187680 696 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Gm5279-201ENSMUST00000199575 745 ntBASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Usp6nlQ80XC3 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 34.8 ms