Protein–RNA interactions for Protein: Q80X53

Ccdc116, Coiled-coil domain-containing protein 116, mousemouse

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc116Q80X53 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Dph3-205ENSMUST00000124303 809 ntTSL 2 BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 2410006H16Rik-201ENSMUST00000131787 462 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Gm11025-201ENSMUST00000140773 466 ntBASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Cox6c-205ENSMUST00000156915 606 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Gm45612-201ENSMUST00000211320 160 ntBASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
Ccdc116Q80X53 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Plppr2-202ENSMUST00000188468 1480 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm3252-201ENSMUST00000165619 1949 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm37437-201ENSMUST00000194451 1937 ntBASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm6756-201ENSMUST00000180647 1620 ntBASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm43332-201ENSMUST00000202511 1044 ntBASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Tssc4-208ENSMUST00000208779 647 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Hist1h2bn-201ENSMUST00000091709 381 ntAPPRIS P1 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Sbk2-205ENSMUST00000208109 1422 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Noct-201ENSMUST00000023849 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.06□□□□□ -0.16
Ccdc116Q80X53 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
Ccdc116Q80X53 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Scap-201ENSMUST00000098350 4227 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Cradd-201ENSMUST00000053594 1661 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Sfxn5-203ENSMUST00000113787 638 ntTSL 2 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Znrf1-213ENSMUST00000174333 515 ntTSL 3 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Ccdc116Q80X53 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 34.4 ms