Protein–RNA interactions for Protein: Q80V85

Trim62, E3 ubiquitin-protein ligase TRIM62, mousemouse

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim62Q80V85 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Tdrd7-201ENSMUST00000102929 3716 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim62Q80V85 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Slc8a3-201ENSMUST00000064594 4379 ntAPPRIS ALT1 TSL 5 BASIC14.86□□□□□ -0.03
Trim62Q80V85 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim62Q80V85 Fbxl16-201ENSMUST00000045692 3478 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim62Q80V85 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim62Q80V85 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Gm4081-201ENSMUST00000195287 1838 ntBASIC14.85□□□□□ -0.03
Trim62Q80V85 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Adam9-202ENSMUST00000084035 3985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Gm15862-201ENSMUST00000146349 361 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Mir99ahg-211ENSMUST00000183099 1189 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Gm27533-201ENSMUST00000183800 152 ntBASIC14.85□□□□□ -0.03
Trim62Q80V85 Gm28277-201ENSMUST00000187450 885 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 AC131690.1-201ENSMUST00000218406 374 ntBASIC14.85□□□□□ -0.03
Trim62Q80V85 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.85□□□□□ -0.03
Trim62Q80V85 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Slc4a1-201ENSMUST00000006749 4545 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC14.85□□□□□ -0.03
Trim62Q80V85 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim62Q80V85 AC162938.1-201ENSMUST00000213140 2323 ntBASIC14.84□□□□□ -0.03
Trim62Q80V85 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 Hagh-202ENSMUST00000118788 1191 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.84□□□□□ -0.03
Trim62Q80V85 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC14.84□□□□□ -0.03
Trim62Q80V85 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Trim62Q80V85 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim62Q80V85 Dap3-207ENSMUST00000173135 1409 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.03
Trim62Q80V85 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Trim62Q80V85 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim62Q80V85 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim62Q80V85 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Trim62Q80V85 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Pus1-207ENSMUST00000170468 1510 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Mrpl55-204ENSMUST00000108786 757 ntTSL 2 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gtf2a2-202ENSMUST00000118198 893 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm13383-201ENSMUST00000131190 1171 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm27680-201ENSMUST00000184192 160 ntBASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm20646-202ENSMUST00000199521 660 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.83□□□□□ -0.04
Trim62Q80V85 Gm43509-201ENSMUST00000196551 2594 ntBASIC14.83□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 41 ms