Protein–RNA interactions for Protein: Q80T11

Ush1g, Usher syndrome type-1G protein homolog, mousemouse

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1gQ80T11 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 6030408B16Rik-202ENSMUST00000191426 1947 ntAPPRIS P5 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Ush1gQ80T11 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Gm15222-202ENSMUST00000228667 1726 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Gm6912-201ENSMUST00000117218 544 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Gm6222-201ENSMUST00000120787 396 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Cd63-ps-201ENSMUST00000145417 875 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Gm23984-201ENSMUST00000157139 203 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 AC130829.1-201ENSMUST00000221548 494 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Cdk7-205ENSMUST00000225990 1159 ntBASIC15.71■□□□□ 0.11
Ush1gQ80T11 Fthl17c-201ENSMUST00000075792 850 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Ush1gQ80T11 Adam10-201ENSMUST00000067880 4593 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ush1gQ80T11 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Ush1gQ80T11 Sema4c-203ENSMUST00000191677 3779 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Ush1gQ80T11 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Mpped1-201ENSMUST00000046168 3265 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Tmprss12-201ENSMUST00000096200 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC15.7■□□□□ 0.1
Ush1gQ80T11 1600025M17Rik-202ENSMUST00000151426 547 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Gm16476-201ENSMUST00000221544 139 ntBASIC15.7■□□□□ 0.1
Ush1gQ80T11 Gm6180-201ENSMUST00000065243 498 ntBASIC15.7■□□□□ 0.1
Ush1gQ80T11 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Ush1gQ80T11 Ahctf1-201ENSMUST00000027768 8506 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.69■□□□□ 0.1
Ush1gQ80T11 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.69■□□□□ 0.1
Ush1gQ80T11 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Rnd1-202ENSMUST00000109149 1034 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Gm37230-201ENSMUST00000194491 818 ntBASIC15.69■□□□□ 0.1
Ush1gQ80T11 Gm45195-201ENSMUST00000205597 1008 ntBASIC15.69■□□□□ 0.1
Ush1gQ80T11 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC15.69■□□□□ 0.1
Ush1gQ80T11 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Dupd1-202ENSMUST00000224735 548 ntBASIC15.69■□□□□ 0.1
Ush1gQ80T11 Utp4-201ENSMUST00000047629 2232 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Slc8b1-201ENSMUST00000068326 2898 ntAPPRIS P2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ush1gQ80T11 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms