Protein–RNA interactions for Protein: Q6ZQF0

Topbp1, DNA topoisomerase 2-binding protein 1, mousemouse

Predictions only

Length 1,515 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1Q6ZQF0 Gm18052-201ENSMUST00000208750 559 ntBASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 AC154462.2-201ENSMUST00000227519 370 ntBASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Rn7sk-201ENSMUST00000083103 331 ntBASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Gm26315-201ENSMUST00000083890 321 ntBASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Sncaip-205ENSMUST00000178011 3433 ntAPPRIS P3 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Tmc8-203ENSMUST00000117781 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Wdr53-201ENSMUST00000023474 1394 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Ankrd13b-201ENSMUST00000037593 3105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
Topbp1Q6ZQF0 Ndufs5-202ENSMUST00000106206 599 ntAPPRIS P1 TSL 3 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm13786-201ENSMUST00000122371 333 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm25927-201ENSMUST00000175058 117 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm44127-201ENSMUST00000203565 291 ntTSL 3 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 0610005C13Rik-202ENSMUST00000209510 671 ntTSL 3 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm2824-203ENSMUST00000226189 1228 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Acadvl-202ENSMUST00000102574 2168 ntAPPRIS P2 TSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Krt9-201ENSMUST00000059707 2580 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm13342-201ENSMUST00000121055 207 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Tnni2-206ENSMUST00000149529 768 ntAPPRIS P1 TSL 2 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm44064-201ENSMUST00000204964 1087 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm7619-201ENSMUST00000210649 1282 ntBASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Gm31992-201ENSMUST00000213387 862 ntTSL 5 BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Topbp1Q6ZQF0 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Mycl-201ENSMUST00000030407 3501 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Krt35-201ENSMUST00000103127 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm22323-201ENSMUST00000103832 109 ntBASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Emd-204ENSMUST00000119197 768 ntTSL 3 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Armc2-208ENSMUST00000162405 1135 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm8584-201ENSMUST00000171982 758 ntBASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Mir3102-201ENSMUST00000175555 104 ntBASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Gm38158-201ENSMUST00000194617 339 ntBASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 n-R5s195-201ENSMUST00000082891 119 ntBASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Igbp1b-201ENSMUST00000054786 1456 ntAPPRIS P1 BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Wdr91-201ENSMUST00000081214 2682 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
Topbp1Q6ZQF0 Znrf1-204ENSMUST00000171182 5466 ntTSL 3 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Mxi1-202ENSMUST00000025998 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Nadk2-203ENSMUST00000100790 3665 ntAPPRIS ALT2 TSL 5 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm43548-201ENSMUST00000197139 2353 ntBASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Nrxn2-202ENSMUST00000113458 3503 ntTSL 5 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm14350-201ENSMUST00000116642 640 ntBASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm15869-201ENSMUST00000126427 734 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm33474-201ENSMUST00000199486 1231 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Il15-202ENSMUST00000209363 1251 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Jakmip1-215ENSMUST00000212047 1191 ntTSL 5 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Ccdc113-201ENSMUST00000041569 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Zkscan14-203ENSMUST00000198959 2243 ntBASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Cant1-206ENSMUST00000164927 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Scrn3-202ENSMUST00000112050 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
Topbp1Q6ZQF0 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Gm7895-201ENSMUST00000187459 1173 ntBASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Msra-205ENSMUST00000210428 1180 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 AC131997.1-201ENSMUST00000228611 1229 ntBASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
Topbp1Q6ZQF0 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC19.83■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms