Protein–RNA interactions for Protein: Q6PDY0

Ccdc85b, Coiled-coil domain-containing protein 85B, mousemouse

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc85bQ6PDY0 Gm12585-201ENSMUST00000117307 290 ntBASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Wisp1-202ENSMUST00000118823 708 ntTSL 5 BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Rad51d-202ENSMUST00000021033 1201 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Tmem253-203ENSMUST00000227295 704 ntAPPRIS ALT2 BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
Ccdc85bQ6PDY0 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Mrpl44-201ENSMUST00000027464 1424 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Rnf145-201ENSMUST00000019333 3570 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Mybl1-201ENSMUST00000088658 4980 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Dnase2a-206ENSMUST00000145292 678 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Oprm1-229ENSMUST00000152674 1179 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Cryge-202ENSMUST00000161960 690 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Tcf21-202ENSMUST00000218002 1788 ntBASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Fbxw17-201ENSMUST00000046974 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Slc25a29-201ENSMUST00000021693 1976 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Rabl6-201ENSMUST00000058137 3230 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Ccdc190-201ENSMUST00000094348 1731 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Gm5912-201ENSMUST00000122282 1438 ntBASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
Ccdc85bQ6PDY0 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Timm10b-202ENSMUST00000106780 671 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Car15-201ENSMUST00000118960 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Rn7s1-201ENSMUST00000174924 300 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Rn7s2-201ENSMUST00000175032 300 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Gm26461-201ENSMUST00000175064 290 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Gm8565-201ENSMUST00000183259 1014 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 AC154532.1-201ENSMUST00000227860 965 ntBASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Chd1-205ENSMUST00000173311 4211 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Rnaseh2a-210ENSMUST00000147812 1532 ntAPPRIS P1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
Ccdc85bQ6PDY0 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Hemk1-202ENSMUST00000118051 453 ntTSL 3 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Neat1-203ENSMUST00000174829 1030 ntTSL 5 BASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Gm27847-201ENSMUST00000183711 107 ntBASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Gm27375-201ENSMUST00000183799 107 ntBASIC14.9□□□□□ -0.02
Ccdc85bQ6PDY0 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms