Protein–RNA interactions for Protein: Q6PDQ2

Chd4, Chromodomain-helicase-DNA-binding protein 4, mousemouse

Known RBP Predictions only

Length 1,915 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd4Q6PDQ2 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Gm43755-201ENSMUST00000200001 408 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Lrp8os1-201ENSMUST00000030352 672 ntTSL 5 BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
Chd4Q6PDQ2 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Ccdc24-209ENSMUST00000171052 891 ntAPPRIS P1 TSL 5 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Tgif2-ps1-201ENSMUST00000203590 713 ntBASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Spc24-204ENSMUST00000216057 627 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Rdh5-201ENSMUST00000026406 1258 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC18.42■□□□□ 0.54
Chd4Q6PDQ2 Gm22018-201ENSMUST00000104357 131 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm16342-201ENSMUST00000124025 1025 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm22331-201ENSMUST00000158066 136 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm26721-201ENSMUST00000181723 992 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm45505-201ENSMUST00000210252 948 ntTSL 5 BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 9230110C19Rik-202ENSMUST00000215478 533 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Tmem256-201ENSMUST00000094065 492 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Med4-201ENSMUST00000022705 1328 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Ttll3-206ENSMUST00000204026 1472 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Camk2d-204ENSMUST00000106400 2722 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Sgk1-202ENSMUST00000092673 2576 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Eaf2-204ENSMUST00000114829 1030 ntAPPRIS P2 TSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm11814-201ENSMUST00000119515 929 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm20219-201ENSMUST00000209718 1269 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 Gm10478-201ENSMUST00000084451 396 ntBASIC18.41■□□□□ 0.54
Chd4Q6PDQ2 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Tmem159-202ENSMUST00000118737 1395 ntAPPRIS P1 TSL 5 BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Stxbp5-209ENSMUST00000141722 4702 ntAPPRIS P2 TSL 5 BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm12537-201ENSMUST00000119266 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm12070-201ENSMUST00000119551 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm12671-201ENSMUST00000119978 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm13292-201ENSMUST00000120014 1000 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm12403-201ENSMUST00000121384 959 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Proscos-202ENSMUST00000178990 666 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm10359-201ENSMUST00000180167 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm12033-201ENSMUST00000180654 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm5559-201ENSMUST00000180755 1002 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm4335-201ENSMUST00000182581 1004 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Mir6420-201ENSMUST00000185032 102 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Snx24-201ENSMUST00000025417 994 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Bst2-201ENSMUST00000051672 792 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm648-201ENSMUST00000081133 1040 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Gm6091-201ENSMUST00000098307 165 ntBASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 A330035P11Rik-202ENSMUST00000144926 3074 ntTSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
Chd4Q6PDQ2 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC18.39■□□□□ 0.54
Chd4Q6PDQ2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gm45784-201ENSMUST00000188360 142 ntBASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Poli-201ENSMUST00000043286 2591 ntTSL 1 (best) BASIC18.39■□□□□ 0.53
Chd4Q6PDQ2 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC18.39■□□□□ 0.53
Retrieved 100 of 76,532 protein–RNA pairs in 31.9 ms