Protein–RNA interactions for Protein: Q6P1D7

Slx4, Structure-specific endonuclease subunit SLX4, mousemouse

Predictions only

Length 1,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slx4Q6P1D7 Zfp879-203ENSMUST00000109134 2414 ntAPPRIS P1 TSL 5 BASIC21.77■■□□□ 1.08
Slx4Q6P1D7 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slx4Q6P1D7 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slx4Q6P1D7 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC21.77■■□□□ 1.07
Slx4Q6P1D7 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC21.77■■□□□ 1.07
Slx4Q6P1D7 Art3-204ENSMUST00000119587 1310 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 AC114543.1-201ENSMUST00000226451 1558 ntBASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Gypc-203ENSMUST00000174459 2180 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Rab11fip3-202ENSMUST00000120691 5103 ntAPPRIS ALT2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Tmod4-202ENSMUST00000107227 1260 ntAPPRIS P1 TSL 5 BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Cts7-204ENSMUST00000225321 1257 ntBASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC21.76■■□□□ 1.07
Slx4Q6P1D7 AC154412.1-201ENSMUST00000226540 2786 ntBASIC21.76■■□□□ 1.07
Slx4Q6P1D7 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Nrxn2-208ENSMUST00000137166 6314 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC21.75■■□□□ 1.07
Slx4Q6P1D7 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Vav2-201ENSMUST00000056176 5221 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Traf7-210ENSMUST00000176353 2503 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Pdlim3-201ENSMUST00000034053 1604 ntAPPRIS P2 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Zbtb7a-201ENSMUST00000048128 5938 ntAPPRIS P1 TSL 1 (best) BASIC21.75■■□□□ 1.07
Slx4Q6P1D7 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Gm44066-201ENSMUST00000203263 519 ntTSL 3 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Krt36-201ENSMUST00000107416 1671 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Gm38266-201ENSMUST00000194931 421 ntBASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Gm45881-201ENSMUST00000210659 517 ntTSL 5 BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC21.74■■□□□ 1.07
Slx4Q6P1D7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Gm29199-201ENSMUST00000187766 775 ntBASIC21.73■■□□□ 1.07
Slx4Q6P1D7 2900093K20Rik-201ENSMUST00000190930 567 ntBASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 AC164612.1-201ENSMUST00000216699 517 ntTSL 5 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC21.73■■□□□ 1.07
Slx4Q6P1D7 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Gm12199-201ENSMUST00000137567 517 ntTSL 3 BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Luc7l2-208ENSMUST00000161538 4253 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC21.72■■□□□ 1.07
Slx4Q6P1D7 Gm13859-201ENSMUST00000119936 1423 ntBASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Gsdma3-201ENSMUST00000073295 1477 ntAPPRIS P2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC21.71■■□□□ 1.07
Slx4Q6P1D7 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC21.71■■□□□ 1.07
Retrieved 100 of 76,532 protein–RNA pairs in 25.6 ms