Protein–RNA interactions for Protein: Q66PY1

Scube3, Signal peptide, CUB and EGF-like domain-containing protein 3, mousemouse

Predictions only

Length 993 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scube3Q66PY1 Prss47-201ENSMUST00000182457 828 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 AC149588.3-201ENSMUST00000227515 150 ntBASIC15.12■□□□□ 0.01
Scube3Q66PY1 Aga-201ENSMUST00000033920 1181 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Drd5-201ENSMUST00000041646 3152 ntAPPRIS P1 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Mtcl1-211ENSMUST00000177034 5441 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Cry2-202ENSMUST00000111278 2160 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Abr-203ENSMUST00000094012 5236 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Scube3Q66PY1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Tle1-204ENSMUST00000102848 3660 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Bmp8b-201ENSMUST00000002457 2940 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Adcy1-201ENSMUST00000020706 12259 ntAPPRIS P1 TSL 2 BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Gm6222-201ENSMUST00000120787 396 ntBASIC15.11■□□□□ 0.01
Scube3Q66PY1 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC15.11■□□□□ 0.01
Scube3Q66PY1 AA543401-201ENSMUST00000164248 1269 ntBASIC15.11■□□□□ 0.01
Scube3Q66PY1 Gm27631-201ENSMUST00000184163 466 ntBASIC15.11■□□□□ 0.01
Scube3Q66PY1 Gm38230-201ENSMUST00000193572 1159 ntBASIC15.11■□□□□ 0.01
Scube3Q66PY1 B9d2-203ENSMUST00000205658 995 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.11■□□□□ 0.01
Scube3Q66PY1 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Sympk-201ENSMUST00000023882 4116 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Ccnf-201ENSMUST00000115390 3099 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Scube3Q66PY1 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 St6gal2-201ENSMUST00000025000 6066 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 AC148324.1-201ENSMUST00000219034 4240 ntBASIC15.1■□□□□ 0.01
Scube3Q66PY1 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Trim41-201ENSMUST00000047145 3432 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Adprm-201ENSMUST00000116363 1283 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Haghl-207ENSMUST00000140738 1194 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Tmem150cos-201ENSMUST00000143245 1216 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.1■□□□□ 0.01
Scube3Q66PY1 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Ubn2-201ENSMUST00000039127 4243 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Scube3Q66PY1 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Gm37297-201ENSMUST00000192974 2384 ntBASIC15.1■□□□□ 0.01
Scube3Q66PY1 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Scube3Q66PY1 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Txnrd1-206ENSMUST00000219442 3531 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Tctn3-202ENSMUST00000132452 1271 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Cklf-210ENSMUST00000212939 737 ntAPPRIS ALT2 TSL 3 BASIC15.09■□□□□ 0.01
Scube3Q66PY1 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Scube3Q66PY1 AC090659.2-201ENSMUST00000225378 1186 ntBASIC15.09■□□□□ 0.01
Scube3Q66PY1 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 77 ms