Protein–RNA interactions for Protein: Q64519

Sdc3, Syndecan-3, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sdc3Q64519 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc3Q64519 Eif4a3-201ENSMUST00000026667 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Sdc3Q64519 Arhgef40-204ENSMUST00000182061 4756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.84□□□□□ -0.19
Sdc3Q64519 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 1810008I18Rik-201ENSMUST00000185464 2419 ntBASIC13.84□□□□□ -0.19
Sdc3Q64519 Hsph1-205ENSMUST00000201452 3140 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm11682-201ENSMUST00000144689 516 ntTSL 3 BASIC13.84□□□□□ -0.19
Sdc3Q64519 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm5479-201ENSMUST00000160578 435 ntBASIC13.84□□□□□ -0.19
Sdc3Q64519 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.84□□□□□ -0.19
Sdc3Q64519 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Prg3-201ENSMUST00000028466 949 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Sdc3Q64519 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Tspan15-201ENSMUST00000047883 3638 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Efcab8-203ENSMUST00000175856 1703 ntAPPRIS ALT2 TSL 2 BASIC13.84□□□□□ -0.19
Sdc3Q64519 Dnajb2-210ENSMUST00000188931 3066 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Sdc3Q64519 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC13.83□□□□□ -0.2
Sdc3Q64519 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm13517-201ENSMUST00000120782 1495 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm4691-201ENSMUST00000182339 1000 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm29541-201ENSMUST00000191351 678 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 4930448I06Rik-201ENSMUST00000194002 546 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm2451-201ENSMUST00000199447 999 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm10290-201ENSMUST00000200451 999 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm20949-201ENSMUST00000206478 952 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Gm18049-201ENSMUST00000208909 581 ntBASIC13.83□□□□□ -0.2
Sdc3Q64519 Smco4-201ENSMUST00000045620 954 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Tmem255a-203ENSMUST00000089056 1745 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Hic1-201ENSMUST00000055619 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Sdc3Q64519 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 3110082I17Rik-201ENSMUST00000066052 1429 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Gm20444-201ENSMUST00000174014 648 ntTSL 3 BASIC13.82□□□□□ -0.2
Sdc3Q64519 AA465934-202ENSMUST00000176545 356 ntTSL 2 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Gm27622-201ENSMUST00000183779 60 ntBASIC13.82□□□□□ -0.2
Sdc3Q64519 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Mcee-203ENSMUST00000206194 532 ntTSL 2 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
Sdc3Q64519 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Sdc3Q64519 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Zufsp-205ENSMUST00000218880 2005 ntTSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Rbm7-202ENSMUST00000213276 2629 ntTSL 2 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Sdc3Q64519 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Sdc3Q64519 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.81□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.3 ms