Protein–RNA interactions for Protein: Q62205

Scn9a, Sodium channel protein type 9 subunit alpha, mousemouse

Predictions only

Length 1,984 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn9aQ62205 Gm20404-201ENSMUST00000174032 621 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm32850-202ENSMUST00000209149 732 ntTSL 5 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Mien1-201ENSMUST00000002655 747 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Mettl5-201ENSMUST00000060447 968 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Pde7a-202ENSMUST00000099195 6298 ntAPPRIS ALT1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC16.62■□□□□ 0.25
Scn9aQ62205 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Arhgef1-218ENSMUST00000206508 3195 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Scn9aQ62205 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC16.61■□□□□ 0.25
Scn9aQ62205 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Gm10156-201ENSMUST00000122364 462 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 Ssr4-208ENSMUST00000166518 800 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.61■□□□□ 0.25
Scn9aQ62205 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.61■□□□□ 0.25
Scn9aQ62205 Swi5-207ENSMUST00000183946 768 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Gm38223-201ENSMUST00000194484 695 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 Gm3786-201ENSMUST00000202659 378 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 AC140406.1-201ENSMUST00000226481 465 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.61■□□□□ 0.25
Scn9aQ62205 Ttyh3-202ENSMUST00000197452 4576 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Ttc34-203ENSMUST00000207854 4733 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
Scn9aQ62205 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Gm10584-201ENSMUST00000207036 2628 ntBASIC16.61■□□□□ 0.25
Scn9aQ62205 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Ank1-207ENSMUST00000118733 8201 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
Scn9aQ62205 Gm16315-201ENSMUST00000163009 783 ntTSL 3 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm24420-201ENSMUST00000176676 59 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Itk-202ENSMUST00000101306 1185 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm15371-201ENSMUST00000117057 784 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm15808-201ENSMUST00000119046 604 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm11793-201ENSMUST00000120433 981 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Mir7070-201ENSMUST00000183657 86 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Cryaa-201ENSMUST00000019192 1176 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
Scn9aQ62205 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC16.6■□□□□ 0.25
Scn9aQ62205 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Asap2-203ENSMUST00000090834 5097 ntTSL 5 BASIC16.6■□□□□ 0.25
Scn9aQ62205 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Tor1b-201ENSMUST00000028199 3039 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 4933406I18Rik-201ENSMUST00000124673 905 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Gm12843-201ENSMUST00000137607 601 ntTSL 3 BASIC16.59■□□□□ 0.25
Scn9aQ62205 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn9aQ62205 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.59■□□□□ 0.25
Scn9aQ62205 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Ifi35-201ENSMUST00000010502 1362 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Cops7a-202ENSMUST00000112439 1328 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
Scn9aQ62205 Gm11557-201ENSMUST00000120200 1008 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Creb3-206ENSMUST00000167751 1212 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
Scn9aQ62205 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn9aQ62205 Gm8927-201ENSMUST00000181978 981 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Gm3222-201ENSMUST00000071282 990 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Snora73a-201ENSMUST00000082453 205 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Pcmt1-208ENSMUST00000162606 2757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn9aQ62205 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.25
Scn9aQ62205 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.58■□□□□ 0.25
Scn9aQ62205 Gm12846-201ENSMUST00000120431 1373 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.58■□□□□ 0.25
Scn9aQ62205 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Rab33b-201ENSMUST00000054387 3492 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC16.58■□□□□ 0.24
Scn9aQ62205 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Gm13342-201ENSMUST00000121055 207 ntBASIC16.58■□□□□ 0.24
Scn9aQ62205 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
Scn9aQ62205 AC114543.1-201ENSMUST00000226451 1558 ntBASIC16.58■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 52.8 ms