Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.65■□□□□ 0.42
Trim27Q62158 Nr2f1-205ENSMUST00000150498 2588 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
Trim27Q62158 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
Trim27Q62158 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
Trim27Q62158 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 BC001981-202ENSMUST00000191393 1545 ntBASIC17.64■□□□□ 0.41
Trim27Q62158 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Tmem201-201ENSMUST00000054459 4631 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm6222-201ENSMUST00000120787 396 ntBASIC17.64■□□□□ 0.41
Trim27Q62158 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm15199-201ENSMUST00000129933 542 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Haghl-206ENSMUST00000138759 1074 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Hoga1-204ENSMUST00000172244 631 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm40123-201ENSMUST00000198175 1027 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm30684-201ENSMUST00000205632 600 ntTSL 3 BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC17.64■□□□□ 0.41
Trim27Q62158 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC17.64■□□□□ 0.41
Trim27Q62158 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
Trim27Q62158 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Wdr47-201ENSMUST00000051145 4222 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC17.63■□□□□ 0.41
Trim27Q62158 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Gm12264-201ENSMUST00000123949 500 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Gm8584-201ENSMUST00000171982 758 ntBASIC17.63■□□□□ 0.41
Trim27Q62158 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Erich4-201ENSMUST00000098663 911 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Gm9109-201ENSMUST00000120254 1405 ntBASIC17.63■□□□□ 0.41
Trim27Q62158 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
Trim27Q62158 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
Trim27Q62158 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim27Q62158 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Acvr1c-203ENSMUST00000112607 1266 ntTSL 5 BASIC17.62■□□□□ 0.41
Trim27Q62158 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Gm13883-202ENSMUST00000151310 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Gm27631-201ENSMUST00000184163 466 ntBASIC17.62■□□□□ 0.41
Trim27Q62158 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 AC166574.6-201ENSMUST00000227889 1806 ntBASIC17.62■□□□□ 0.41
Trim27Q62158 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Rai1-201ENSMUST00000064190 7348 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
Trim27Q62158 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
Trim27Q62158 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC17.62■□□□□ 0.41
Trim27Q62158 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Gm26513-201ENSMUST00000181802 2489 ntBASIC17.61■□□□□ 0.41
Trim27Q62158 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Per3-201ENSMUST00000103204 5999 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Meig1-204ENSMUST00000115083 567 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
Trim27Q62158 Cd209f-202ENSMUST00000138439 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Cd209f-203ENSMUST00000145007 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Gm6736-201ENSMUST00000166583 948 ntBASIC17.61■□□□□ 0.41
Trim27Q62158 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC17.61■□□□□ 0.41
Trim27Q62158 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
Trim27Q62158 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
Trim27Q62158 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
Trim27Q62158 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
Retrieved 100 of 76,532 protein–RNA pairs in 36.6 ms