Protein–RNA interactions for Protein: Q62059

Vcan, Versican core protein, mousemouse

Predictions only

Length 3,357 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VcanQ62059 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.23□□□□□ -0.29
VcanQ62059 Gm18905-201ENSMUST00000205454 928 ntBASIC13.23□□□□□ -0.29
VcanQ62059 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VcanQ62059 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Wee1-201ENSMUST00000033326 3419 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Mir6927-201ENSMUST00000184494 71 ntBASIC13.23□□□□□ -0.29
VcanQ62059 Gm5565-201ENSMUST00000199463 1162 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
VcanQ62059 Gm44545-201ENSMUST00000208262 746 ntBASIC13.23□□□□□ -0.29
VcanQ62059 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
VcanQ62059 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.23□□□□□ -0.29
VcanQ62059 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.23□□□□□ -0.29
VcanQ62059 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Snx8-205ENSMUST00000196566 1914 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
VcanQ62059 Prkab1-202ENSMUST00000111999 2026 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VcanQ62059 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Gm27320-201ENSMUST00000184892 109 ntBASIC13.22□□□□□ -0.29
VcanQ62059 2810405F17Rik-201ENSMUST00000189334 1117 ntBASIC13.22□□□□□ -0.29
VcanQ62059 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC13.22□□□□□ -0.29
VcanQ62059 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC13.22□□□□□ -0.29
VcanQ62059 Gm43072-201ENSMUST00000200283 1671 ntBASIC13.22□□□□□ -0.29
VcanQ62059 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Otud5-201ENSMUST00000033494 4259 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Toe1-202ENSMUST00000106455 1209 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Aif1-206ENSMUST00000173324 875 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Tmem267-202ENSMUST00000176171 880 ntAPPRIS P1 TSL 2 BASIC13.22□□□□□ -0.29
VcanQ62059 Gm30459-201ENSMUST00000206203 1193 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Txndc17-201ENSMUST00000021158 981 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.22□□□□□ -0.29
VcanQ62059 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Gm45760-201ENSMUST00000212190 1782 ntBASIC13.22□□□□□ -0.29
VcanQ62059 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC13.22□□□□□ -0.29
VcanQ62059 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.22□□□□□ -0.29
VcanQ62059 Med20-201ENSMUST00000024778 2054 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
VcanQ62059 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.22□□□□□ -0.29
VcanQ62059 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Tescl-201ENSMUST00000069562 855 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VcanQ62059 Parg-202ENSMUST00000163350 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.21□□□□□ -0.29
VcanQ62059 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Mapt-201ENSMUST00000100347 1362 ntAPPRIS P4 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Htr7-205ENSMUST00000166074 3079 ntTSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Pex5l-206ENSMUST00000108226 2632 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC13.21□□□□□ -0.29
VcanQ62059 Bloc1s2-ps-201ENSMUST00000183232 432 ntBASIC13.21□□□□□ -0.29
VcanQ62059 4931419H13Rik-201ENSMUST00000199770 973 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Mrto4-ps1-201ENSMUST00000220565 721 ntBASIC13.21□□□□□ -0.29
VcanQ62059 Gm19605-202ENSMUST00000221514 1084 ntTSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Krtap5-1-201ENSMUST00000084413 588 ntAPPRIS P1 TSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Tcf3-201ENSMUST00000020377 2842 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.29
VcanQ62059 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Pcna-201ENSMUST00000028817 1518 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.29
VcanQ62059 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
VcanQ62059 Gm26464-201ENSMUST00000157094 305 ntBASIC13.21□□□□□ -0.3
VcanQ62059 Krtap4-7-201ENSMUST00000055121 984 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
VcanQ62059 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC13.21□□□□□ -0.3
VcanQ62059 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VcanQ62059 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VcanQ62059 Nkx3-1-201ENSMUST00000022646 3195 ntAPPRIS P1 TSL 1 (best) BASIC13.21□□□□□ -0.3
VcanQ62059 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.21□□□□□ -0.3
VcanQ62059 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.21□□□□□ -0.3
VcanQ62059 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VcanQ62059 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Gm12241-201ENSMUST00000118330 726 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Gm13813-201ENSMUST00000120998 787 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Gm12208-201ENSMUST00000122004 163 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Gm2991-201ENSMUST00000173338 480 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Gm17586-201ENSMUST00000181502 908 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 4921536K21Rik-201ENSMUST00000020712 2590 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.2□□□□□ -0.3
VcanQ62059 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC13.2□□□□□ -0.3
VcanQ62059 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
VcanQ62059 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
VcanQ62059 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
VcanQ62059 Gm12566-201ENSMUST00000121479 359 ntBASIC13.2□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 49 ms