Protein–RNA interactions for Protein: Q61321

Six4, Homeobox protein SIX4, mousemouse

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Six4Q61321 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC14.49□□□□□ -0.09
Six4Q61321 Dupd1-202ENSMUST00000224735 548 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC14.49□□□□□ -0.09
Six4Q61321 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.49□□□□□ -0.09
Six4Q61321 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Six4Q61321 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.49□□□□□ -0.09
Six4Q61321 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC14.49□□□□□ -0.09
Six4Q61321 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.49□□□□□ -0.09
Six4Q61321 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Six4Q61321 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Neto1-201ENSMUST00000058829 3531 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC14.48□□□□□ -0.09
Six4Q61321 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.48□□□□□ -0.09
Six4Q61321 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC14.48□□□□□ -0.09
Six4Q61321 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Six4Q61321 Zfp715-201ENSMUST00000012796 907 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.48□□□□□ -0.09
Six4Q61321 AC124732.2-201ENSMUST00000221977 316 ntBASIC14.48□□□□□ -0.09
Six4Q61321 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Six4Q61321 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC14.48□□□□□ -0.09
Six4Q61321 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Klhl9-201ENSMUST00000094993 4174 ntAPPRIS P1 BASIC14.48□□□□□ -0.09
Six4Q61321 Rbfox2-209ENSMUST00000228087 1694 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Six4Q61321 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Fam149b-211ENSMUST00000224930 2716 ntAPPRIS ALT2 BASIC14.48□□□□□ -0.09
Six4Q61321 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.48□□□□□ -0.09
Six4Q61321 Dnm1-205ENSMUST00000113365 3257 ntAPPRIS ALT1 TSL 5 BASIC14.47□□□□□ -0.09
Six4Q61321 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Spag1-202ENSMUST00000171205 3219 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Mmp14-206ENSMUST00000225641 3238 ntBASIC14.47□□□□□ -0.09
Six4Q61321 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Rfc3-201ENSMUST00000038131 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Gabra4-201ENSMUST00000031121 4108 ntAPPRIS P2 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Six4Q61321 Cend1-204ENSMUST00000164387 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC14.47□□□□□ -0.09
Six4Q61321 Gm27622-201ENSMUST00000183779 60 ntBASIC14.47□□□□□ -0.09
Six4Q61321 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.47□□□□□ -0.09
Six4Q61321 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.47□□□□□ -0.09
Six4Q61321 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.47□□□□□ -0.09
Six4Q61321 Cfl1-202ENSMUST00000209469 2354 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.47□□□□□ -0.09
Six4Q61321 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.47□□□□□ -0.09
Six4Q61321 Phtf2-201ENSMUST00000118174 4840 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
Six4Q61321 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Myo15b-202ENSMUST00000093911 9340 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Gm24543-201ENSMUST00000103867 82 ntBASIC14.46□□□□□ -0.09
Six4Q61321 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Gm27533-201ENSMUST00000183800 152 ntBASIC14.46□□□□□ -0.09
Six4Q61321 Gm16476-201ENSMUST00000221544 139 ntBASIC14.46□□□□□ -0.09
Six4Q61321 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.46□□□□□ -0.09
Six4Q61321 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Mir125a-201ENSMUST00000083545 68 ntBASIC14.46□□□□□ -0.09
Six4Q61321 Serpina16-201ENSMUST00000095451 1257 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
Six4Q61321 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
Six4Q61321 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.1
Six4Q61321 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 62.7 ms