Protein–RNA interactions for Protein: Q61245

Col11a1, Collagen alpha-1(XI) chain, mousemouse

Predictions only

Length 1,804 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col11a1Q61245 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Col11a1Q61245 Tldc2-201ENSMUST00000099140 608 ntAPPRIS ALT2 TSL 5 BASIC15.78■□□□□ 0.12
Col11a1Q61245 Rnf26-205ENSMUST00000215685 1804 ntTSL 5 BASIC15.77■□□□□ 0.12
Col11a1Q61245 Gbx1-201ENSMUST00000088311 3475 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Aqp3-201ENSMUST00000055327 1765 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Carlr-201ENSMUST00000181515 2574 ntBASIC15.77■□□□□ 0.12
Col11a1Q61245 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.12
Col11a1Q61245 Mir877-201ENSMUST00000104738 85 ntBASIC15.77■□□□□ 0.11
Col11a1Q61245 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC15.77■□□□□ 0.11
Col11a1Q61245 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col11a1Q61245 Tm2d2-202ENSMUST00000210536 727 ntTSL 3 BASIC15.77■□□□□ 0.11
Col11a1Q61245 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col11a1Q61245 Bcs1l-203ENSMUST00000113733 1488 ntAPPRIS P1 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col11a1Q61245 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col11a1Q61245 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC15.77■□□□□ 0.11
Col11a1Q61245 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC15.77■□□□□ 0.11
Col11a1Q61245 Col15a1-202ENSMUST00000102917 5172 ntAPPRIS P2 TSL 1 (best) BASIC15.77■□□□□ 0.11
Col11a1Q61245 Gm16011-201ENSMUST00000121567 2662 ntBASIC15.76■□□□□ 0.11
Col11a1Q61245 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col11a1Q61245 Sgce-204ENSMUST00000115577 1776 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC15.76■□□□□ 0.11
Col11a1Q61245 Gm44632-201ENSMUST00000207245 474 ntTSL 2 BASIC15.76■□□□□ 0.11
Col11a1Q61245 Gm17870-201ENSMUST00000219489 1174 ntBASIC15.76■□□□□ 0.11
Col11a1Q61245 Tyms-ps-201ENSMUST00000219550 915 ntBASIC15.76■□□□□ 0.11
Col11a1Q61245 Gm4935-201ENSMUST00000221316 1198 ntBASIC15.76■□□□□ 0.11
Col11a1Q61245 Dph3-201ENSMUST00000022461 1057 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Itm2b-204ENSMUST00000228637 783 ntBASIC15.76■□□□□ 0.11
Col11a1Q61245 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Olfr142-201ENSMUST00000099752 918 ntAPPRIS P1 BASIC15.76■□□□□ 0.11
Col11a1Q61245 Hs2st1-201ENSMUST00000043325 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Cd47-201ENSMUST00000084838 5277 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Rmi2-201ENSMUST00000037913 3742 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Kcnj8-202ENSMUST00000203945 2548 ntAPPRIS P1 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Rbfox2-204ENSMUST00000171751 3558 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC15.76■□□□□ 0.11
Col11a1Q61245 Dennd3-201ENSMUST00000043414 5299 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm13123-201ENSMUST00000122173 492 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm16570-201ENSMUST00000161951 436 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 D930030I03Rik-201ENSMUST00000180735 920 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Anapc16-202ENSMUST00000182116 581 ntTSL 3 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Sox2ot-205ENSMUST00000196795 754 ntTSL 3 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Mcrip1-201ENSMUST00000034913 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Olfr12-201ENSMUST00000081274 1121 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Zbtb46-205ENSMUST00000180222 2014 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Wnt4-201ENSMUST00000045747 4194 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Maf-202ENSMUST00000109104 6360 ntAPPRIS P2 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Ankle2-202ENSMUST00000086674 5025 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm13730-201ENSMUST00000121036 1462 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Mettl17-206ENSMUST00000164902 1461 ntAPPRIS ALT2 TSL 5 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Plaur-201ENSMUST00000002284 1506 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm11618-201ENSMUST00000117946 267 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm13369-201ENSMUST00000119442 987 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm12216-202ENSMUST00000120776 826 ntAPPRIS ALT2 TSL 2 BASIC15.75■□□□□ 0.11
Col11a1Q61245 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm6621-201ENSMUST00000193251 772 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm42550-201ENSMUST00000201553 960 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 AC132384.14-201ENSMUST00000219346 1147 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 BC049730-201ENSMUST00000051714 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Gm10146-201ENSMUST00000072739 309 ntBASIC15.75■□□□□ 0.11
Col11a1Q61245 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 Ttc9-202ENSMUST00000218362 4754 ntAPPRIS P1 TSL 1 (best) BASIC15.75■□□□□ 0.11
Col11a1Q61245 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC15.74■□□□□ 0.11
Col11a1Q61245 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
Col11a1Q61245 Rragd-203ENSMUST00000098190 5008 ntAPPRIS P1 TSL 2 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Klhl26-204ENSMUST00000209567 2615 ntTSL 3 BASIC15.74■□□□□ 0.11
Col11a1Q61245 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC15.74■□□□□ 0.11
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms