Protein–RNA interactions for Protein: Q60847

Col12a1, Collagen alpha-1(XII) chain, mousemouse

Predictions only

Length 3,120 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col12a1Q60847 Abhd14a-202ENSMUST00000171678 1262 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 7530416G11Rik-201ENSMUST00000178942 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Rnf180-201ENSMUST00000069686 1728 ntAPPRIS P2 TSL 5 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Kazn-201ENSMUST00000036476 3843 ntAPPRIS P2 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Det1-202ENSMUST00000107431 1439 ntTSL 5 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC13.9□□□□□ -0.18
Col12a1Q60847 BC037039-201ENSMUST00000192003 2205 ntBASIC13.9□□□□□ -0.18
Col12a1Q60847 Pin4-201ENSMUST00000113627 489 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC13.9□□□□□ -0.18
Col12a1Q60847 Gm29264-201ENSMUST00000191240 1264 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Gm7046-201ENSMUST00000221351 977 ntBASIC13.9□□□□□ -0.18
Col12a1Q60847 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
Col12a1Q60847 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Brd1-203ENSMUST00000109381 4886 ntTSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Fam71e1-201ENSMUST00000107927 862 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Gm12134-201ENSMUST00000122109 520 ntBASIC13.89□□□□□ -0.19
Col12a1Q60847 BC046401-201ENSMUST00000155786 847 ntTSL 3 BASIC13.89□□□□□ -0.19
Col12a1Q60847 2010010A06Rik-201ENSMUST00000185628 258 ntBASIC13.89□□□□□ -0.19
Col12a1Q60847 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Gm5773-201ENSMUST00000090853 1143 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Kctd18-202ENSMUST00000114410 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Syce1-201ENSMUST00000026553 1460 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Snap91-201ENSMUST00000036347 4237 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Etfrf1-207ENSMUST00000111726 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Snx29-202ENSMUST00000115814 1125 ntTSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Ccser2-208ENSMUST00000183007 1293 ntTSL 5 BASIC13.89□□□□□ -0.19
Col12a1Q60847 Gm38223-201ENSMUST00000194484 695 ntBASIC13.89□□□□□ -0.19
Col12a1Q60847 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 AC161252.3-201ENSMUST00000225465 1549 ntBASIC13.89□□□□□ -0.19
Col12a1Q60847 Rbm26-202ENSMUST00000100327 3634 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Smad7-201ENSMUST00000026999 4278 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Col12a1Q60847 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Foxo6os-201ENSMUST00000152384 2291 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm16425-201ENSMUST00000118143 3130 ntBASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm10710-201ENSMUST00000047876 3971 ntBASIC13.88□□□□□ -0.19
Col12a1Q60847 Mymx-201ENSMUST00000113529 442 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
Col12a1Q60847 G630018N14Rik-201ENSMUST00000135656 1231 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm20636-201ENSMUST00000176660 707 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 1500004A13Rik-208ENSMUST00000184958 823 ntTSL 3 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC13.88□□□□□ -0.19
Col12a1Q60847 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC13.88□□□□□ -0.19
Col12a1Q60847 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Aipl1-201ENSMUST00000048207 2309 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Pdhx-202ENSMUST00000111183 2078 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm11839-201ENSMUST00000120647 1953 ntBASIC13.88□□□□□ -0.19
Col12a1Q60847 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Smurf1-203ENSMUST00000110677 5420 ntTSL 5 BASIC13.88□□□□□ -0.19
Col12a1Q60847 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm12167-201ENSMUST00000148132 578 ntTSL 2 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm43597-201ENSMUST00000201650 1057 ntTSL 3 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Ldha-213ENSMUST00000210631 685 ntTSL 5 BASIC13.88□□□□□ -0.19
Col12a1Q60847 Gm40437-201ENSMUST00000222338 767 ntTSL 5 BASIC13.88□□□□□ -0.19
Col12a1Q60847 AC122371.3-201ENSMUST00000223402 1061 ntBASIC13.88□□□□□ -0.19
Col12a1Q60847 Ggact-201ENSMUST00000038075 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 C130074G19Rik-201ENSMUST00000048308 3035 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
Col12a1Q60847 Cct8-201ENSMUST00000026704 2394 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm12348-201ENSMUST00000138915 313 ntTSL 3 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Gm42929-201ENSMUST00000198374 1286 ntBASIC13.87□□□□□ -0.19
Col12a1Q60847 Crip3-201ENSMUST00000024764 955 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Col12a1Q60847 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 27.4 ms