Protein–RNA interactions for Protein: Q5SX79

Shroom1, Protein Shroom1, mousemouse

Predictions only

Length 823 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shroom1Q5SX79 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC15.3■□□□□ 0.04
Shroom1Q5SX79 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Cdcp1-201ENSMUST00000039229 5310 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Foxo1-201ENSMUST00000053764 8665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Medag-201ENSMUST00000093110 2953 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Zfyve27-201ENSMUST00000099443 2573 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Gm15321-201ENSMUST00000121290 288 ntBASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 H2bfm-201ENSMUST00000059808 1052 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Zc3h13-203ENSMUST00000227049 6144 ntAPPRIS ALT2 BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
Shroom1Q5SX79 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Siglecf-201ENSMUST00000012798 2510 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gtpbp10-211ENSMUST00000198799 648 ntBASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Olfr286-202ENSMUST00000205305 969 ntBASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Dupd1-202ENSMUST00000224735 548 ntBASIC15.28■□□□□ 0.04
Shroom1Q5SX79 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.28■□□□□ 0.04
Shroom1Q5SX79 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gm10322-201ENSMUST00000095646 336 ntAPPRIS P1 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Klhl11-201ENSMUST00000056665 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Gm9856-201ENSMUST00000217077 2578 ntBASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
Shroom1Q5SX79 Pcdha4-202ENSMUST00000192512 5363 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Rragb-201ENSMUST00000039720 2258 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Gm27631-201ENSMUST00000184163 466 ntBASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Gm44855-201ENSMUST00000205725 362 ntBASIC15.27■□□□□ 0.04
Shroom1Q5SX79 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
Shroom1Q5SX79 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Lancl3-201ENSMUST00000069763 3991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Fndc7-201ENSMUST00000053065 3009 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
Shroom1Q5SX79 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC15.26■□□□□ 0.03
Shroom1Q5SX79 Dnm1-204ENSMUST00000113352 4605 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
Retrieved 100 of 76,532 protein–RNA pairs in 81.5 ms