Protein–RNA interactions for Protein: Q5SPW0

Vps54, Vacuolar protein sorting-associated protein 54, mousemouse

Predictions only

Length 977 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vps54Q5SPW0 Gm43703-201ENSMUST00000200523 763 ntBASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Adamts17-201ENSMUST00000098382 6025 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Fhad1-201ENSMUST00000036701 1366 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Eomes-201ENSMUST00000035020 3560 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Zbtb25-204ENSMUST00000176278 1672 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Vps54Q5SPW0 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm45667-201ENSMUST00000210380 1316 ntBASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Asprv1-201ENSMUST00000043400 1547 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Ube2d-ps-205ENSMUST00000142942 1840 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Cd63-ps-201ENSMUST00000145417 875 ntBASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Mrps18c-201ENSMUST00000016977 638 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm26935-201ENSMUST00000182686 519 ntTSL 5 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Acrbp-205ENSMUST00000112414 1498 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Eif3f-201ENSMUST00000033342 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm12620-201ENSMUST00000119791 1986 ntBASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Gm12612-201ENSMUST00000140182 1986 ntBASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Arhgef33-202ENSMUST00000223878 3253 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Arhgef33-201ENSMUST00000068175 3260 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
Vps54Q5SPW0 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Gm44981-201ENSMUST00000205549 1943 ntBASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Cpne6-201ENSMUST00000074225 2201 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Vps54Q5SPW0 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Vps54Q5SPW0 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Vps54Q5SPW0 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Pcdha3-201ENSMUST00000192503 5332 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Clnkos-201ENSMUST00000114080 439 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Gm12134-201ENSMUST00000122109 520 ntBASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Gm6916-202ENSMUST00000205523 195 ntBASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Clec4g-202ENSMUST00000062037 1242 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Rpl10-ps2-201ENSMUST00000098432 645 ntBASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Tnip2-201ENSMUST00000030991 2022 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Vps54Q5SPW0 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 54.9 ms