Protein–RNA interactions for Protein: Q5R1F6

Trav5d-4, T cell receptor alpha variable 5D-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5d-4Q5R1F6 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Nop53-201ENSMUST00000044158 3176 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Hps5-201ENSMUST00000014562 4953 ntAPPRIS P3 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Pls1-201ENSMUST00000093800 3704 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Gm27525-201ENSMUST00000184465 107 ntBASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Gm6443-201ENSMUST00000203599 874 ntBASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 CT030684.1-201ENSMUST00000227292 914 ntBASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Tulp2-205ENSMUST00000107762 1883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Marveld2-203ENSMUST00000168772 1888 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC12.37□□□□□ -0.43
Trav5d-4Q5R1F6 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Commd10-201ENSMUST00000049388 1561 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Slc25a47-201ENSMUST00000057026 1580 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Arl11-201ENSMUST00000055159 1482 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Pgd-201ENSMUST00000084124 2218 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Cd164l2-201ENSMUST00000105910 986 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gm17613-201ENSMUST00000138893 669 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gm27920-201ENSMUST00000183953 96 ntBASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gm37230-201ENSMUST00000194491 818 ntBASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Lce1f-201ENSMUST00000047153 728 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Aire-213ENSMUST00000148469 1618 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Usp42-201ENSMUST00000053287 5151 ntAPPRIS P1 TSL 5 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Smpd1-201ENSMUST00000046983 2412 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav5d-4Q5R1F6 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Cbln4-201ENSMUST00000087950 2902 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Agap1-201ENSMUST00000027521 11921 ntAPPRIS P4 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Gm6973-201ENSMUST00000117080 721 ntBASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Tpm3-203ENSMUST00000119158 1090 ntTSL 3 BASIC12.35□□□□□ -0.43
Trav5d-4Q5R1F6 Gm14042-201ENSMUST00000120139 833 ntBASIC12.35□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 47.1 ms