Protein–RNA interactions for Protein: Q5R1D2

Trav15-1-dv6-1, T cell receptor alpha variable 15-1-DV6-1 (Fragment), mousemouse

Predictions only

Length 117 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15-1-dv6-1Q5R1D2 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tnnt2-203ENSMUST00000112086 1094 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tnnt2-204ENSMUST00000112087 1112 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Eif4e2-205ENSMUST00000113232 1125 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Fgf20-202ENSMUST00000118639 587 ntTSL 3 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm6659-201ENSMUST00000174752 547 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tnnt2-206ENSMUST00000178854 1076 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm4535-201ENSMUST00000182274 558 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tnnt2-211ENSMUST00000189355 1112 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm13830-205ENSMUST00000201195 1155 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm4316-202ENSMUST00000212490 1115 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm7787-201ENSMUST00000216858 688 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC159106.1-201ENSMUST00000224421 690 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC154757.1-201ENSMUST00000228289 336 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rfc4-201ENSMUST00000023598 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Kcnk16-201ENSMUST00000024155 916 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm10355-201ENSMUST00000097146 517 ntBASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dhrs3-206ENSMUST00000154208 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.18□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC121805.2-201ENSMUST00000218808 2538 ntBASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc52a3-201ENSMUST00000073228 2669 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Smc6-208ENSMUST00000218866 3373 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm10830-201ENSMUST00000186379 636 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Jagn1-202ENSMUST00000204254 1147 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Calml4-206ENSMUST00000215870 803 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Ifi27l2b-201ENSMUST00000044687 1093 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm5617-201ENSMUST00000048824 531 ntAPPRIS P1 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gm45003-201ENSMUST00000205875 2158 ntBASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Reep5-201ENSMUST00000006027 2894 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Trav15-1-dv6-1Q5R1D2 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.17□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms