Protein–RNA interactions for Protein: Q4VGL6

Rc3h1, Roquin-1, mousemouse

Known RBP Predictions only

Length 1,130 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h1Q4VGL6 Gm45195-201ENSMUST00000205597 1008 ntBASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 AC135669.1-201ENSMUST00000213585 412 ntBASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Cited1-201ENSMUST00000050551 901 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Smtnl2-202ENSMUST00000108500 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
Rc3h1Q4VGL6 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Cyp4f37-201ENSMUST00000077639 2642 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Spryd3-203ENSMUST00000154032 2456 ntAPPRIS P1 TSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Cacna1h-201ENSMUST00000078496 8220 ntAPPRIS P2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm15460-201ENSMUST00000118147 391 ntBASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm15957-201ENSMUST00000118893 974 ntBASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm19891-201ENSMUST00000189771 303 ntBASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Ighv1-25-201ENSMUST00000195638 345 ntBASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Tgif2-ps2-201ENSMUST00000061746 711 ntBASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
Rc3h1Q4VGL6 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Slc38a7-201ENSMUST00000040481 3333 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Rasal3-204ENSMUST00000135618 3293 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Hoxb8-201ENSMUST00000052650 2635 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Rdx-201ENSMUST00000000590 4380 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Hcrt-202ENSMUST00000107360 509 ntTSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Rnaseh2a-206ENSMUST00000128972 1141 ntTSL 2 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gm30934-201ENSMUST00000215803 815 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 AC154846.1-201ENSMUST00000226278 862 ntBASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 mt-Rnr1-201ENSMUST00000082388 955 ntBASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Hist1h2al-201ENSMUST00000091708 339 ntBASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Gm9856-201ENSMUST00000217077 2578 ntBASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Rc3h1Q4VGL6 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Fam131a-201ENSMUST00000056518 2432 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Ptk7-201ENSMUST00000044442 4255 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Gm21854-201ENSMUST00000179901 471 ntBASIC16.54■□□□□ 0.24
Rc3h1Q4VGL6 Gm43356-201ENSMUST00000196582 609 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms