Protein–RNA interactions for Protein: Q4U2R1

Herc2, E3 ubiquitin-protein ligase HERC2, mousemouse

Predictions only

Length 4,836 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Herc2Q4U2R1 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Ywhaq-ps2-201ENSMUST00000117738 643 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm7541-201ENSMUST00000118361 535 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Has2os-201ENSMUST00000125401 485 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm29797-201ENSMUST00000207856 755 ntAPPRIS P1 TSL 5 BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm18027-201ENSMUST00000218947 619 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Nme8-202ENSMUST00000091763 2122 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 A130048G24Rik-201ENSMUST00000193052 2750 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Ints8-202ENSMUST00000108318 3169 ntTSL 5 BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Tmem17-201ENSMUST00000059319 1568 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm12363-201ENSMUST00000122250 668 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Vmn1r-ps63-201ENSMUST00000174565 989 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm44064-201ENSMUST00000204964 1087 ntBASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm44702-201ENSMUST00000209194 592 ntTSL 3 BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Magi2-205ENSMUST00000197354 4785 ntAPPRIS ALT2 TSL 5 BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC8.3□□□□□ -1.08
Herc2Q4U2R1 Ifna15-201ENSMUST00000102809 573 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Limd2-203ENSMUST00000106875 936 ntAPPRIS P1 TSL 3 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Pde4b-210ENSMUST00000172616 823 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ceacam1-209ENSMUST00000206687 1061 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 AC159819.2-201ENSMUST00000216151 342 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 AC123665.1-201ENSMUST00000228204 438 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm7292-201ENSMUST00000194706 2527 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Dedd-204ENSMUST00000111300 2563 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Nadk-203ENSMUST00000105613 3152 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Prelid1-201ENSMUST00000021942 2644 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Churc1-203ENSMUST00000126408 462 ntTSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm13061-201ENSMUST00000137962 664 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm19353-201ENSMUST00000184561 445 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm43916-201ENSMUST00000205062 967 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Mt1-202ENSMUST00000211807 1085 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Dclk1-215ENSMUST00000200352 1662 ntTSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Mri1-203ENSMUST00000126435 2819 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Armcx1-204ENSMUST00000113198 2085 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Smim10l1-201ENSMUST00000100864 2842 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ccl27a-204ENSMUST00000108035 731 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ccl27a-205ENSMUST00000108036 841 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ccl27a-206ENSMUST00000108037 590 ntAPPRIS ALT2 TSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 9230102O04Rik-201ENSMUST00000114915 528 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm11930-201ENSMUST00000117788 190 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ip6k2-206ENSMUST00000193560 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Abcd4-201ENSMUST00000021666 2309 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Smu1-201ENSMUST00000030117 2418 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Adcyap1r1-204ENSMUST00000165857 1491 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm12948-201ENSMUST00000119406 682 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm29083-201ENSMUST00000189205 733 ntTSL 3 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm44552-201ENSMUST00000205458 1247 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 AC158516.1-201ENSMUST00000213921 205 ntTSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 AC159376.1-201ENSMUST00000218504 630 ntBASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Gm11938-201ENSMUST00000072306 663 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Map2k5-201ENSMUST00000034920 2310 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Daw1-201ENSMUST00000065403 1651 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
Herc2Q4U2R1 Tulp2-202ENSMUST00000085331 1525 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Paqr8-202ENSMUST00000167119 1472 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Pabpc1l2a-ps-201ENSMUST00000128361 513 ntBASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Ecscr-204ENSMUST00000133064 1055 ntAPPRIS ALT2 TSL 2 BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Gm25604-201ENSMUST00000158359 133 ntBASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Gm13278-201ENSMUST00000177771 549 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Gm13275-201ENSMUST00000178347 549 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Herc2Q4U2R1 Gm13277-201ENSMUST00000178480 549 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms