Protein–RNA interactions for Protein: Q4FK66

Prpf38a, Pre-mRNA-splicing factor 38A, mousemouse

Known RBP Predictions only

Length 312 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf38aQ4FK66 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 1700012B07Rik-202ENSMUST00000106674 2035 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Mdm1-202ENSMUST00000163238 2461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Zfp90-201ENSMUST00000034382 2632 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Prpf38aQ4FK66 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Pacs2-201ENSMUST00000084891 5480 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gm22189-201ENSMUST00000103822 86 ntBASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gm15393-201ENSMUST00000120499 219 ntBASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Tpd52-206ENSMUST00000121038 849 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Cxcl17-202ENSMUST00000200880 760 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 AC155729.1-201ENSMUST00000227758 544 ntBASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Cxcl17-201ENSMUST00000074040 761 ntAPPRIS ALT2 TSL 5 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Ccdc160-201ENSMUST00000101588 1536 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
Prpf38aQ4FK66 Med14-202ENSMUST00000096495 6963 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gm21854-201ENSMUST00000179901 471 ntBASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gm6473-201ENSMUST00000188572 1210 ntBASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gm42612-201ENSMUST00000197986 623 ntBASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gm43170-201ENSMUST00000199827 612 ntBASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Hsd17b14-205ENSMUST00000210300 797 ntTSL 5 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Nrsn1-204ENSMUST00000167305 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Prpf38aQ4FK66 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Ttyh1-203ENSMUST00000119661 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Zfp647-201ENSMUST00000048854 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Alk-201ENSMUST00000086639 4866 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 B230359F08Rik-201ENSMUST00000103671 426 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Gm12859-201ENSMUST00000117834 427 ntBASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Flt3l-201ENSMUST00000146760 1075 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Gm13568-201ENSMUST00000156099 446 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Trp53tg5-201ENSMUST00000017864 934 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 AC153872.1-201ENSMUST00000199539 128 ntBASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 1700028J19Rik-203ENSMUST00000206686 1166 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 AC154806.6-201ENSMUST00000228192 202 ntBASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Prpf38aQ4FK66 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Retrieved 100 of 76,532 protein–RNA pairs in 48.4 ms