Protein–RNA interactions for Protein: Q3V061

Trim80, Tripartite motif-containing 80, mousemouse

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim80Q3V061 Gm43056-201ENSMUST00000197865 2791 ntBASIC14.88□□□□□ -0.03
Trim80Q3V061 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Col1a2-201ENSMUST00000031668 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Egfl7-216ENSMUST00000174211 1163 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Mir8117-201ENSMUST00000184773 107 ntBASIC14.88□□□□□ -0.03
Trim80Q3V061 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC14.88□□□□□ -0.03
Trim80Q3V061 AL669916.2-201ENSMUST00000213219 358 ntTSL 2 BASIC14.88□□□□□ -0.03
Trim80Q3V061 Pfn3-201ENSMUST00000054146 545 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
Trim80Q3V061 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
Trim80Q3V061 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC14.88□□□□□ -0.03
Trim80Q3V061 Unc5b-203ENSMUST00000218637 3653 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Echdc2-201ENSMUST00000052999 1307 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
Trim80Q3V061 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ftsj1-202ENSMUST00000115594 1529 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Luc7l3-209ENSMUST00000166312 5244 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Gm14822-201ENSMUST00000122247 291 ntBASIC14.87□□□□□ -0.03
Trim80Q3V061 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC14.87□□□□□ -0.03
Trim80Q3V061 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Gm15246-201ENSMUST00000149873 540 ntTSL 3 BASIC14.87□□□□□ -0.03
Trim80Q3V061 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 1500035N22Rik-201ENSMUST00000075081 865 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Smpd4-221ENSMUST00000170996 1619 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ankrd16-201ENSMUST00000056108 1618 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 A830012C17Rik-201ENSMUST00000131498 1665 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Ndufv1-201ENSMUST00000042497 1661 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Trim80Q3V061 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Lrrc14-210ENSMUST00000155735 2286 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Tmem217-201ENSMUST00000114683 904 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gm11764-201ENSMUST00000120221 623 ntBASIC14.86□□□□□ -0.03
Trim80Q3V061 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gucy2e-202ENSMUST00000108664 4415 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Nfatc2ip-201ENSMUST00000075671 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Trim80Q3V061 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Lcat-201ENSMUST00000038896 1342 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Trim80Q3V061 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC14.86□□□□□ -0.03
Trim80Q3V061 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Acaa1b-201ENSMUST00000010795 1689 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
Trim80Q3V061 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Fam3a-203ENSMUST00000114139 931 ntTSL 5 BASIC14.85□□□□□ -0.03
Trim80Q3V061 Gm11767-201ENSMUST00000129379 493 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC14.85□□□□□ -0.03
Trim80Q3V061 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Trim80Q3V061 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms