Protein–RNA interactions for Protein: Q3UWA4

Trim40, Tripartite motif-containing protein 40, mousemouse

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim40Q3UWA4 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Gm37411-201ENSMUST00000194180 2282 ntBASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Gm5184-201ENSMUST00000220417 1702 ntBASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
Trim40Q3UWA4 Npcd-202ENSMUST00000089299 1453 ntAPPRIS P4 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Plch2-210ENSMUST00000176194 5619 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Gm9726-201ENSMUST00000180321 678 ntBASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Methig1-201ENSMUST00000075675 1029 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Birc5-201ENSMUST00000081387 947 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 St13-205ENSMUST00000172107 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Bhlhb9-204ENSMUST00000180025 2812 ntAPPRIS P1 TSL 2 BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
Trim40Q3UWA4 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Hid1-201ENSMUST00000044152 3236 ntAPPRIS ALT1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gm13830-205ENSMUST00000201195 1155 ntBASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Tsr3-201ENSMUST00000063574 1192 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gfra4-202ENSMUST00000066958 783 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Gnai1-201ENSMUST00000074694 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Ppp3cb-205ENSMUST00000161445 3298 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.47□□□□□ -0.25
Trim40Q3UWA4 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Armcx6-202ENSMUST00000113194 2120 ntAPPRIS P1 TSL 2 BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Ilvbl-201ENSMUST00000105384 2329 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Rgs16-201ENSMUST00000027748 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Ablim1-202ENSMUST00000099294 6232 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Trim40Q3UWA4 Nkx6-3-201ENSMUST00000071588 2238 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms