Protein–RNA interactions for Protein: Q3TCX3

Khdc4, KH homology domain-containing protein 4, mousemouse

Predictions only

Length 612 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Khdc4Q3TCX3 Gatsl3-201ENSMUST00000020699 1574 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Emp2-201ENSMUST00000078357 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.69□□□□□ -0.22
Khdc4Q3TCX3 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 2310011J03Rik-201ENSMUST00000020341 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Ttc22-201ENSMUST00000047922 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 2810408I11Rik-202ENSMUST00000150749 711 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Pkig-209ENSMUST00000164399 983 ntAPPRIS P1 TSL 2 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gm27437-201ENSMUST00000183429 107 ntBASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Rbfox2-208ENSMUST00000227930 1218 ntBASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Caly-201ENSMUST00000026541 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gpbar1-201ENSMUST00000077985 1075 ntAPPRIS P1 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Ankrd13b-202ENSMUST00000092892 3336 ntAPPRIS P2 TSL 5 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Atp2b3-202ENSMUST00000088429 4483 ntAPPRIS P2 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Bsx-201ENSMUST00000067375 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC13.68□□□□□ -0.22
Khdc4Q3TCX3 Dnajc28-201ENSMUST00000049244 1891 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Tmem199-201ENSMUST00000052566 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Slc22a15-207ENSMUST00000190824 3010 ntTSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Fbxl12-205ENSMUST00000140702 1555 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Ylpm1-201ENSMUST00000021670 7003 ntAPPRIS P2 TSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Rpl9-202ENSMUST00000118543 1193 ntTSL 2 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm13453-201ENSMUST00000118708 357 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm14206-201ENSMUST00000132973 747 ntTSL 3 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm11773-201ENSMUST00000138256 497 ntTSL 2 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm16137-201ENSMUST00000161571 664 ntTSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm5866-201ENSMUST00000177881 973 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Mir8102-201ENSMUST00000184148 139 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Klk2-ps-201ENSMUST00000205342 571 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 AC164567.1-201ENSMUST00000219185 960 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Arhgef33-209ENSMUST00000225223 714 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Rhbdl2-201ENSMUST00000053202 1217 ntAPPRIS P1 TSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm45133-201ENSMUST00000207548 2773 ntBASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gjb3-202ENSMUST00000106091 1623 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Catip-204ENSMUST00000191010 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Gm29208-203ENSMUST00000213687 2219 ntTSL 5 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC13.67□□□□□ -0.22
Khdc4Q3TCX3 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Dusp13-202ENSMUST00000119866 1342 ntTSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Tmod2-208ENSMUST00000215614 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Sema4c-201ENSMUST00000114991 3773 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Khdc4Q3TCX3 Taf6-201ENSMUST00000048698 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms